Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  156 bits (394), Expect = 3e-42
 Identities = 113/390 (28%), Positives = 190/390 (48%), Gaps = 10/390 (2%)

Query: 130 GLLIIVPLKAGKNADLVGYLVTEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQ 189
           G+++ +P    +N  L   L  +   D+ Q   +    +A ++     L+ L+ I WL  
Sbjct: 329 GVVVTLP----RNVMLADTLKLQDVLDKAQAAGTL---KALLVGAAAALLGLLLI-WLTA 380

Query: 190 RTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDR 249
             +  P+N++  +   +ASG  DL+ R+ + K +ELG+LAN  + F+ K++ T A IK  
Sbjct: 381 TGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELANWFNRFLDKLQPTIAQIKQS 440

Query: 250 IVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQA 309
           I E    + +      +    +  Q  EI       ++   +   V  S   A+ + + A
Sbjct: 441 ITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSATAHDVANSASNAASAARGA 500

Query: 310 VTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLA 369
             S+ +  + + ++      L E+          L    E++  +L++IRSIAEQTNLLA
Sbjct: 501 DQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQIGSVLEVIRSIAEQTNLLA 560

Query: 370 LNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESL 429
           LNAAIEAARAGE+GRGFAVVADEVR+LA++T  S  ++  ++ ++   +R ++  M  S 
Sbjct: 561 LNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLVIERIQSGTRGVVATMHSSQ 620

Query: 430 VAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHAR 489
             A++    I   +  + K    V   +  N      +EQQ+ + E++   +  +     
Sbjct: 621 SQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQSAVAEEVNRNVSAI-RTVT 679

Query: 490 ELLTDSATISEH-SKELLRSASQTRSNLKQ 518
           E LT  AT S   S +L   ASQ    + Q
Sbjct: 680 ETLTGQATESAAISSQLNALASQQMKLMDQ 709