Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  144 bits (364), Expect = 7e-39
 Identities = 114/437 (26%), Positives = 203/437 (46%), Gaps = 20/437 (4%)

Query: 86  YTFNAKGQVLYNAKNTSDTATSLNQWVTQPPSDQA--VRKNTDGHEGLLIIVPLKA--GK 141
           +  +A G+VL +        T  + +    P   A       +G + ++  +P+K     
Sbjct: 195 FLVSADGKVLVHPDKNLVMKTLADVYPKNTPKISADFSEVEANGKDNIVTFIPIKGLPSV 254

Query: 142 NADLVGYLVTEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKV 201
           N DL G  V +   D+   + S+ R  A + +    +V +IA+  +L R L+ PL+ +  
Sbjct: 255 NWDL-GISVDK---DKSFAMLSEFRTSAVIATF-IAVVIIIALLGMLIRILMQPLHLMTR 309

Query: 202 LCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVE 261
               +A G  DL+ R+  +  +E G L NA + F+ ++ ++   +      V +V+ +V 
Sbjct: 310 AMQDIADGEGDLTRRLTIQNHDEFGMLGNAFNRFVERIHTSIREVSSATEHVNEVALRVV 369

Query: 262 QQIGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLR 321
                   N   Q +  ++  A  +Q   + + +  +   AS     A   +ED +  + 
Sbjct: 370 SASNSSMVNSDEQANRTNSVAAAINQLGAAAQEIARNAAQASHQASDARHLAEDGQQVVE 429

Query: 322 EAQTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGE 381
                  QL      ++     LN++   +  IL++I SI++QTNLLALNAAIEAARAGE
Sbjct: 430 RNIKAMNQLSSMISASSSNIEALNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGE 489

Query: 382 NGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIES 441
            GRGFAVVADEVR+LA +T  S  QV+ ++ +L   +R  +  M ES   +   V     
Sbjct: 490 AGRGFAVVADEVRNLAHRTQESAQQVQKMIEELQVGARESVSTMGESQRHSLESVDIANL 549

Query: 442 GSNLVDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEH 501
               ++     + + +  NQ+    +E+Q  +VE +              +T+  T+++ 
Sbjct: 550 AGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMD-----------ITEINTLNQE 598

Query: 502 SKELLRSASQTRSNLKQ 518
             E L+S  +  ++L+Q
Sbjct: 599 GVENLQSTLRACADLEQ 615