Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  143 bits (361), Expect = 2e-38
 Identities = 107/388 (27%), Positives = 181/388 (46%), Gaps = 33/388 (8%)

Query: 144 DLVGYLVTEW----------GFDQVQQVASQLRNQAFM--LSIGFLLVTLIAIYWLLQRT 191
           D V Y+   W          G  + ++V ++     ++  L +G L++    I     + 
Sbjct: 256 DGVHYMANVWTSPGLGWRYIGLIEHREVMAEATRMTYLTALIVGVLVLIFGLIAAAFSKV 315

Query: 192 LIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTF-------A 244
           ++ P+  +     ++A G  DL   +  +  +E  +LA   + F+A +           A
Sbjct: 316 IVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDETAELAGWFNKFLAAIRQLIQHIGAASA 375

Query: 245 PIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASE 304
            +++     ++V+H + +  GR    +    +  +  VA  ++       V  S   A+E
Sbjct: 376 NLQNASKVNSEVAHNMNEAAGRQREAVELVSTAFNEMVATANE-------VARSCSGAAE 428

Query: 305 SLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQ 364
           S +       + K Q+        +L  +   +++   EL      +  IL  IR+IAEQ
Sbjct: 429 SAENGHRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELEAGSRSINQILGTIRAIAEQ 488

Query: 365 TNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGY 424
           TNLLALNAAIEAARAG+ GRGFAVVADEVR LA++TS ST ++E LL  L   ++ +   
Sbjct: 489 TNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGTLENKTQEVTQK 548

Query: 425 MEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQQ-------NRLVEQL 477
           M   L  +R  V++IES  +  +     VN+    N      +E+Q       NR ++Q+
Sbjct: 549 MGSCLDLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISAAAEEQHSVAEEINRHIQQI 608

Query: 478 LEQLRLLDNHARELLTDSATISEHSKEL 505
            ++ RL+++ A     DS  +S  S EL
Sbjct: 609 YDEARLVESLANSAQDDSGRLSNLSDEL 636