Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  139 bits (350), Expect = 3e-37
 Identities = 96/328 (29%), Positives = 164/328 (50%), Gaps = 21/328 (6%)

Query: 192 LIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIA-------KVESTFA 244
           ++ P+  +      +A G  DL+ ++  +  +E   LA   + F++       ++ +  +
Sbjct: 318 IVRPIRGVADGLQEIAEGEGDLTRQLKVQGKDETASLAGWFNQFLSMIAQLVQRIGNASS 377

Query: 245 PIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASE 304
            ++    +  +V+H + Q  GR    +    +  +  VA  ++       V  S  AA+ 
Sbjct: 378 DLQSAAADTREVAHNMNQAAGRQREAVELVSTAFNEMVATANE-------VARSCSAAAT 430

Query: 305 SLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQ 364
           S  +      D +  + EA     +L E  + +T+T  +L    + +  IL  IRSIAEQ
Sbjct: 431 SADEGYRDVHDGQQHIGEATGSVLKLSEDLQRSTQTMQQLEQDSKNINTILDTIRSIAEQ 490

Query: 365 TNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGY 424
           TNLLALNAAIEAARAG+ GRGFAVVADEVR LA +T+ ST ++++LL  L+  ++ +   
Sbjct: 491 TNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSLLGNLARRTQEVTQQ 550

Query: 425 MEESLVAARNCVAAIESGSNLVDK------AIIDVNQANSTNQNAVHD-SEQQNRLVEQL 477
           M+ SL+ +   V  I+   +  DK      +I D N   +T     H  +E+ NR + Q+
Sbjct: 551 MQGSLLVSHTSVERIQQARDSFDKIRGSVDSIRDQNTQIATAAEEQHQVAEEINRHIAQI 610

Query: 478 LEQLRLLDNHARELLTDSATISEHSKEL 505
               +L++  A    T S  +++ S +L
Sbjct: 611 HADAQLVEGFAHSAQTGSGRLTDISGQL 638