Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  153 bits (386), Expect = 2e-41
 Identities = 106/325 (32%), Positives = 164/325 (50%), Gaps = 6/325 (1%)

Query: 158 VQQVASQLRNQAFMLSI----GFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDL 213
           V +   Q R +  +LSI      LL+ + A+  LL  T++ PL+ +K     +A+G  DL
Sbjct: 192 VVEAKVQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDL 251

Query: 214 SSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHN 273
           + R+     +ELG LA A + F+ K+      I +   ++T +  +V  Q  R E  +  
Sbjct: 252 TRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMER 311

Query: 274 QQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEK 333
           Q+ E        +Q   + + V  S   AS + +Q     + +K  +  +  Q   LV  
Sbjct: 312 QRHETDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVND 371

Query: 334 AEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEV 393
              +  +   L   V  +  +L +IRSIAEQTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 372 IRSSGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEV 431

Query: 394 RHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVA-AIESGSNLVDKAIID 452
           R LA +T  ST +++ ++ +L   +   +  M  S  A     A A E+G++L   A + 
Sbjct: 432 RALASRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQL- 490

Query: 453 VNQANSTNQNAVHDSEQQNRLVEQL 477
           +   NS N      +E+Q  + E++
Sbjct: 491 IGTINSMNAQIASAAEEQTAVAEEI 515