Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  146 bits (369), Expect = 2e-39
 Identities = 101/362 (27%), Positives = 172/362 (47%), Gaps = 4/362 (1%)

Query: 157 QVQQVASQLRNQAFMLSIGFLLVTL-IAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSS 215
           + Q  A   R     L +G L   + + + WL+ R++  P+  +  +   +ASG  DL+ 
Sbjct: 350 KAQMDAENTRGTLLELGLGLLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTR 409

Query: 216 RINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQ 275
           R+ + K +ELGQLA   + F+ K++   A +K  + +    + +      +    +  Q 
Sbjct: 410 RLAYDKQDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQY 469

Query: 276 SEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAE 335
            ++       H+   + + V  S   A+++ + A  ++ D    + E  T N   +    
Sbjct: 470 RQVDQVATASHEMSATAQDVARSAAQAAQAARDADQATRDGLTVI-EHTTHNIGALASDM 528

Query: 336 ITTKTATE-LNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVR 394
            T  T  E L    EK+  +L++IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 529 STAMTQVEGLAANSEKIGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 588

Query: 395 HLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVN 454
           +LA++T  S  +   ++  L   +  ++G M  S   A+  V  +      + +    V 
Sbjct: 589 NLAQRTQESVEETRLVIEHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVT 648

Query: 455 QANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRS 514
             +  N      +E+Q+ + E++   +  +     E L++ A  S    + L S +  + 
Sbjct: 649 VISDMNLQIASAAEEQSAVAEEINNNVATI-RDVTESLSEQANESARVSQALNSLANQQQ 707

Query: 515 NL 516
            L
Sbjct: 708 GL 709