Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  148 bits (373), Expect = 5e-40
 Identities = 100/352 (28%), Positives = 180/352 (51%), Gaps = 6/352 (1%)

Query: 170 FMLSIGFLLVTLIAIYWLLQRTLIAPLNDLK-VLCHALASGSCDLSSRINFRKDNELGQL 228
           + +++  L++ ++    LL R L++ LN LK V+ H   +G  DLS+R+     +E+GQ+
Sbjct: 143 YAVAVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTG--DLSARVPLACKDEVGQM 200

Query: 229 ANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQS 288
           A+A +   A  +     +     ++ D + ++   +  ++H +  QQSE   +    ++ 
Sbjct: 201 ASAFNAMQAGYQRVVNTVAHTARQLDDGAARLASSMNEVQHGMLGQQSETDQAATAINEM 260

Query: 289 QDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQV 348
             ++  + +   A  +  + A T +   +  +   Q     L    + T     +L    
Sbjct: 261 TATVHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQRSIAGLSTGVQQTAVMIQKLAEDS 320

Query: 349 EKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVE 408
           +K+  ++ +I SIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA++  +ST+++ 
Sbjct: 321 QKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQSSTDEIT 380

Query: 409 TLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSE 468
            +++ L   +R+ + +M+ES   A +CV   +     + +    V Q   +N      +E
Sbjct: 381 RMVSALQAGTRDAVDFMQESSFKADDCVHQAQEAGAALAEITGAVAQMRESNTQIAVAAE 440

Query: 469 QQNRLVEQL---LEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLK 517
           QQ+ + E++   +  +R +  +  +   DSAT S     L    S+    LK
Sbjct: 441 QQSHVAEEMNRAVVSIRDVTENTVQQTVDSATTSNQLATLAGELSKAIGQLK 492