Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  155 bits (391), Expect = 5e-42
 Identities = 104/352 (29%), Positives = 176/352 (50%), Gaps = 5/352 (1%)

Query: 162 ASQLRNQAFMLSI-GFLLVTLIAIYW--LLQRTLIAPLNDLKVLCHALASGSCDLSSRIN 218
           A +LRN A    I G +L  LIAI    L+ R +  P+         +A G  DL+  I 
Sbjct: 180 ADELRNSALTWMISGIVLAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQG--DLTQAII 237

Query: 219 FRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEI 278
             + +E GQL  A+ D    ++ST   I +   ++   + ++          +  Q  EI
Sbjct: 238 TERTDEAGQLLMALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEI 297

Query: 279 SNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITT 338
             +    +Q   ++  V  +  + SE+ +QA T +ED + Q+ +A +    +V +   +T
Sbjct: 298 QQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDST 357

Query: 339 KTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAE 398
           ++  +L  QV ++  ++ +IR IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA 
Sbjct: 358 QSVADLAGQVREIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAH 417

Query: 399 KTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANS 458
           +T  ST  +E ++  +   + + +  M +SL  A N     ++    + +    V + N 
Sbjct: 418 RTQISTVDIEKMIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINE 477

Query: 459 TNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSAS 510
            N      SE+Q ++  ++   L  + + + +    +   +  S++L R A+
Sbjct: 478 RNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLAT 529