Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  146 bits (369), Expect = 2e-39
 Identities = 111/395 (28%), Positives = 198/395 (50%), Gaps = 26/395 (6%)

Query: 126 DGHEGLLIIVPLKAGKNADLVGYLVTEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAIY 185
           +G + +L   P+     AD   Y+      D+      + R  A ++++   +V +  + 
Sbjct: 234 NGQDRILSFTPISGLPGADW--YIGLSIDKDKAYAPLGKFRTSA-LIAMLIAVVAIAVLL 290

Query: 186 WLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAP 245
            LL + L+ PL  + V    +A G  DL+ R+     +E G++ +A + F+ ++ ++ + 
Sbjct: 291 SLLIQVLLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISE 350

Query: 246 IKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVA-----IGHQSQDSIKAVTESIY 300
           +     +V D+S +V            ++QS  +NSVA     +G  +Q+  +   ++  
Sbjct: 351 VSSATRQVHDLSQRVMASSNASIIG-SDEQSARTNSVAAAINELGAATQEIARNAADASQ 409

Query: 301 AASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRS 360
            AS + +QA    +D +  + +      +L +K  ++      LN   + +  IL +I+ 
Sbjct: 410 HASGASEQA----DDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKG 465

Query: 361 IAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRN 420
           I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T  S  ++  ++T L   SR 
Sbjct: 466 ISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSRE 525

Query: 421 LIGYMEESLVAARNCV-AAIESGSNLVD--KAIIDVNQANSTNQNAVHDSEQQNRLVEQL 477
            +  M  S  ++   V  A ++G  LV   + I+++   +  NQ+    +E+Q  +VE L
Sbjct: 526 AVTTMNASQTSSEESVEVANQAGERLVSVTQRIVEI---DGMNQSVAAATEEQTAVVETL 582

Query: 478 ---LEQLRLLDN----HARELLTDSATISEHSKEL 505
              + Q+ LL+     +  E L D   +S+ +  L
Sbjct: 583 NVDINQINLLNQQGVANLNETLKDCDALSQQANRL 617