Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  154 bits (389), Expect = 9e-42
 Identities = 108/374 (28%), Positives = 179/374 (47%), Gaps = 19/374 (5%)

Query: 151 TEWGFDQVQQ--VASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALAS 208
           T+W    V    V  Q  N   M+ IG  L  L+ +  L    +   LN+L  + +ALA 
Sbjct: 264 TDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALAD 323

Query: 209 ---GSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIG 265
              G  DL+ R++ R  +E+G LA+  + F+ ++      +++  V +T  +        
Sbjct: 324 IAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASAT 383

Query: 266 RLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQT 325
           +    I  QQ EI+       +   +   +  +    +++  Q+V   ED  AQ+++++ 
Sbjct: 384 QASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQ 443

Query: 326 QNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRG 385
              QL ++     +  +EL     +++ IL  IR IAEQTNLLALNAAIEAARAGE GRG
Sbjct: 444 SIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRG 503

Query: 386 FAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNL 445
           FAVVADEVR L+++T AST +++T +  L   +   +  M ES                L
Sbjct: 504 FAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTES--------------HKL 549

Query: 446 VDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKEL 505
           V+ ++ DVNQ  ++ Q      +Q + +  Q+            ++  ++ ++ E S +L
Sbjct: 550 VETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQL 609

Query: 506 LRSASQTRSNLKQL 519
              A Q+    K L
Sbjct: 610 AEEAQQSVQQAKSL 623