Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (371), Expect = 1e-39
 Identities = 121/434 (27%), Positives = 212/434 (48%), Gaps = 47/434 (10%)

Query: 117 SDQAVRKNTDGHEGLLI------IVPLKAGKNADLVGY---LVTEWGFDQVQQVASQLRN 167
           S QAV K   G  GL++      +  L A    D +G    LVTE   D+     ++L +
Sbjct: 355 SSQAVDKALRGESGLMMESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKLSD 414

Query: 168 QAFM-----LSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKD 222
           +  M     + IG ++ TL A  W++   +  P+ D       ++  + DL+ R++ +  
Sbjct: 415 ELIMKVLIAIVIGAVIATLAA--WMVGNGISKPIRDSISQIQRMSRDN-DLTVRLSEQGS 471

Query: 223 NELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSV 282
           +E+ QLA A++  ++ ++ T       I +    + K+      + HN+   +    NSV
Sbjct: 472 DEIRQLAQALNRMLSHLQDT-------ICQFAHTTDKLNSHTQTITHNMTGTR----NSV 520

Query: 283 AIGHQSQDSI-KAVTE---SIYAASESLKQAVTSSEDSKAQ-----------LREAQTQN 327
           +  H+  DS+  AV E   SI   SE  ++A T  +++  +            R+  + N
Sbjct: 521 SEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSIN 580

Query: 328 QQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFA 387
           QQ+    E   +    LN + + +  +L +I++IAEQTNLLALNAAIEAARAGE GRGFA
Sbjct: 581 QQMASAVEAIAR----LNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFA 636

Query: 388 VVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVD 447
           VVADEVR+LA KT  ST ++ T + +L   +++++  +EE+       VA   S ++++ 
Sbjct: 637 VVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLK 696

Query: 448 KAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLR 507
           + +  +N+ N  N      +EQQ  + E++   +  + + +  +      ++    EL  
Sbjct: 697 QIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSD 756

Query: 508 SASQTRSNLKQLSH 521
            A +    + Q  +
Sbjct: 757 EAMELSKRMGQFRY 770