Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (338), Expect = 7e-36
 Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 44/354 (12%)

Query: 157 QVQQVASQLRNQAFMLSIGFLLVTLIAI--YWLLQRTLIAPLNDLKVLCHALASGSCDLS 214
           Q  Q A Q+++   + +I  ++V +IAI  Y ++ R ++ P++ +  +    A  + DL+
Sbjct: 213 QFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQR-ADDNSDLT 271

Query: 215 SRINFRKDNELGQLANAIDDFIA----------KVESTFAPIKDRIVEVTDVSHKVEQQI 264
            R+  + D+EL  +   I+  +           +V  T + I D I  +TD + K+  Q 
Sbjct: 272 LRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQ- 330

Query: 265 GRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQ 324
                    Q  E+  +     +   ++ +V++S   A E    A   + +SK    +  
Sbjct: 331 ---------QDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTI 381

Query: 325 TQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGR 384
            +   L  + + T++   +L T+   V ++L +I++IAEQTNLLALNAAIEAARAGE GR
Sbjct: 382 REFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGR 441

Query: 385 GFAVVADEVRHLAEKTSASTNQVETLLTQLS-----------------GYSRNLIGYMEE 427
           GFAVVADEVR LA++T  ST ++ET+++ L                    +R  +G   E
Sbjct: 442 GFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANE 501

Query: 428 SLVAARNCVAAIESGSNLVDKAI---IDVNQANSTNQNAVHD-SEQQNRLVEQL 477
           SLVA +     I   +  +  A    + V+   S+N + +   S + N  ++QL
Sbjct: 502 SLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQL 555