Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (339), Expect = 4e-36
 Identities = 107/375 (28%), Positives = 178/375 (47%), Gaps = 21/375 (5%)

Query: 148 YLVTEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIA-PLNDLKVLCHAL 206
           Y  TE    Q +Q A +   ++F+L+  + +   I  YW+   T I   L  L      +
Sbjct: 103 YAYTE-SMKQYEQPAREQALRSFLLTYLWAIPFAIFTYWVA--TFIGGALWVLYTTTQKI 159

Query: 207 ASGSCDLSSRINFRKD-NELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIG 265
           A G  DL+SR+ F    +E G +  A+D  +  +      +K     + D +     ++ 
Sbjct: 160 AEG--DLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVK 217

Query: 266 RLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQT 325
             E  I NQ S + +      +   S   V+ +   A+E  +Q     E S+ ++R+A  
Sbjct: 218 ESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQ 277

Query: 326 QNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRG 385
             +QL       + +   LNT   ++  ++  I +I+EQTNLLALNAAIEAARAGE GRG
Sbjct: 278 DIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRG 337

Query: 386 FAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNL 445
           FAVVADEVR LA +T ++T +++ ++ +L   S+N+    E++       V+   + S L
Sbjct: 338 FAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQT-------VSQAHTSSQL 390

Query: 446 VDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKEL 505
           V +   DV       Q   H ++  N L  Q+        + A ++ ++ + I   S  L
Sbjct: 391 VSEVGNDV-------QAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTL 443

Query: 506 LRSASQTRSNLKQLS 520
            R A QT   + +++
Sbjct: 444 RRVAEQTSQGVSEIT 458