Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  151 bits (381), Expect = 8e-41
 Identities = 100/365 (27%), Positives = 176/365 (48%), Gaps = 5/365 (1%)

Query: 158 VQQVASQLRNQAFMLSIGFLLVTLIAIYW--LLQRTLIAPLNDLKVLCHALASGSCDLSS 215
           V +V ++L   A  + +  L V  I I+    L  ++  P+N +      L  G  DLS 
Sbjct: 279 VHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQ 338

Query: 216 RINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQ 275
           RI  + ++E+ QL+   + FI K+  +   +     E+   +  V ++      N   Q+
Sbjct: 339 RIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQR 398

Query: 276 SEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAE 335
            +    V   +Q   +I  +  +   A+E+  QA  +++  +  + +A+    +L    E
Sbjct: 399 DQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIE 458

Query: 336 ITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRH 395
            T K   +L +  +++  IL  IR I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR+
Sbjct: 459 NTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRN 518

Query: 396 LAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNL---VDKAIID 452
           LA +T++ST +++ ++ QL   ++N +  M+         VAA +    +   +   I D
Sbjct: 519 LASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHD 578

Query: 453 VNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQT 512
           ++  N+    A  +       + Q +E++  ++        + A  S+  +EL     + 
Sbjct: 579 ISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKL 638

Query: 513 RSNLK 517
             N K
Sbjct: 639 VGNFK 643