Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (355), Expect = 7e-38
 Identities = 134/525 (25%), Positives = 246/525 (46%), Gaps = 38/525 (7%)

Query: 1   MKLSI-SRILLLSVSILCTLALLSLTYLTWTK----SVKEMNTISAETFE------KTSL 49
           M L+I  R+ +LS+  L T+AL S+ Y T+++    S ++M        E      K+ L
Sbjct: 1   MSLTIRQRLYILSLVPLLTIAL-SMMYFTFSETRLLSQEQMRNTREAMMEMKQAELKSYL 59

Query: 50  SLADNIATAVRFNKTSAISERVAIELNANPVQLKNVYTFNAKGQVLYNAKNTSDTATS-L 108
            +AD     ++  + + + + +AI       Q   ++ +++KG  L   K T+    + +
Sbjct: 60  QIADTALAPLKARQ-APLDDAIAILREIQFGQSGYIFGYDSKGTRLLLGKATNGLGDNFM 118

Query: 109 NQWVTQPPS-DQAVRKNTDGHEGLLIIVPLKAGKNADL--VGYLV--TEW------GF-- 155
           N   TQ     Q + KN   ++      P K G+   L  + Y V   +W      GF  
Sbjct: 119 NMQDTQGNYLIQDLLKNAKLNQFTTYYFP-KPGEQTPLPKLSYSVYLPQWDLTIGTGFYT 177

Query: 156 DQVQQVASQLRNQA---------FMLSIGFLLVTLIAIYWLL-QRTLIAPLNDLKVLCHA 205
           D V    +++  +A          +  I  L+V L+++  ++  R+++ PL        +
Sbjct: 178 DDVDAEIAEMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISS 237

Query: 206 LASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIG 265
            ASG  DL++R+      E  +L++  + F+  +++    +     +V + ++ + Q+  
Sbjct: 238 FASGDADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRAT 297

Query: 266 RLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQT 325
           +++H   NQ+ E         +   + + ++ +   A++S K A  ++ D    +  A  
Sbjct: 298 QVDHLASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAAR 357

Query: 326 QNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRG 385
             Q L E+    +    +L   V  +T  L +I+ IAEQTNLLALNAAIEAARAGE GRG
Sbjct: 358 SVQALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRG 417

Query: 386 FAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNL 445
           FAVVADEVR LA +T  ST Q+ T++ QL   S   +  ME S   +   V    + +  
Sbjct: 418 FAVVADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEA 477

Query: 446 VDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARE 490
           + K    +      N      +E+Q+ + +++ +++ ++ + + E
Sbjct: 478 LQKIQASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSE 522