Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (391), Expect = 5e-42
 Identities = 109/383 (28%), Positives = 198/383 (51%), Gaps = 37/383 (9%)

Query: 139 AGKNADLVGYLVTEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLND 198
           AG++  L+GY+        +Q    QL  +  +  +    V ++A   +L  +   PL+ 
Sbjct: 200 AGQDWQLIGYI----DLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSF-KPLSR 254

Query: 199 LKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSH 258
           L  L   L+ G+ DL+ R+     +E+GQ+ N+I+ FI K++  F       ++V D S 
Sbjct: 255 LNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMF-------IDVADSSK 307

Query: 259 KVEQQIGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVT--ESIYAASESLKQAVTSS--- 313
           ++++ +      +H      SN   +   +Q++ +A+T  E + A++ S+ Q+   +   
Sbjct: 308 EIDRAV------VHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALL 361

Query: 314 --------EDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQT 365
                   ++SK  + EA      LV +     +T T ++   +++  +LQ+I +IAEQT
Sbjct: 362 TERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQT 421

Query: 366 NLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYM 425
           NLLALNAAIEAARAGE GRGFAVVADEVR LA +T  ST+Q+  +L  L   + N++  M
Sbjct: 422 NLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEM 481

Query: 426 EESLVAARNCVAAIESGSNLVDKAII---DVNQANSTNQNAVHDSEQQNRLVEQLLEQLR 482
           + + +   +C    E  ++++D   +    V + N+ N      + +Q ++  ++ + + 
Sbjct: 482 DSTRI---HCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMA 538

Query: 483 LLDNHARELLTDSATISEHSKEL 505
            +    R+L  ++A ++  S EL
Sbjct: 539 AIQEMVRKLNMNAAQVTSVSNEL 561