Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  152 bits (385), Expect = 2e-41
 Identities = 128/543 (23%), Positives = 244/543 (44%), Gaps = 43/543 (7%)

Query: 5   ISRILLLSVSILCTLALLSLTYLTWTKSVKEMNTISAETFEKTSL---SLADNIATAVRF 61
           +S++LL  +++   +   S +Y  W +     + +S +  +K S    SL   + T    
Sbjct: 6   LSKLLLTLITVFALVLAGSTSYQYWQQKDLIHSVLSEQLHDKASNYFDSLNMMMLTGTMA 65

Query: 62  NKTSAISERVAIE--LNANPVQLKNVYTFNAKGQVLYNAKNTSDTATSLNQWVTQPPSDQ 119
            K +   + +A +       ++  ++      G      K+  D      + + +P    
Sbjct: 66  QKETLRQKALAQDGIEQVRVIRAPSLNKIYGPGSTDQQPKDEIDQRALQGETIIEP---- 121

Query: 120 AVRKNTDGHEGLLIIVPLKAGKN--------------ADLVGYLVTEWGFDQVQQVASQL 165
                 D  +G+++ +P+K+ +N               +++G +  E+  + + Q+    
Sbjct: 122 ---YQADWGKGIVVALPMKSSENYRGTNCVACHIAPEGEVLGVIRLEFNLNHLTQMV--- 175

Query: 166 RNQAFMLSIGFLLVTLIAIYWL----LQRTLIAPLNDLKV-LCHALASGSCDLSSRINFR 220
            N   ++ +G + V  +  + L    ++R ++ PL      +C    S S DLS R+   
Sbjct: 176 -NHRTLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEV--SKSKDLSHRLEND 232

Query: 221 KDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHK---VEQQIGRLEHNIHNQQSE 277
           + +ELGQLA +I+  +  V  +   ++D    + D + K   V Q   +  +N   + +E
Sbjct: 233 RKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAE 292

Query: 278 ISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEIT 337
           +  ++      Q  ++  TE    AS+ +    +  + S  Q   A    + LV   E  
Sbjct: 293 VQTNITDMQGKQQQVEFATEE---ASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAV 349

Query: 338 TKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLA 397
            +   ELN Q  +V+ IL +I+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRHLA
Sbjct: 350 KQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLA 409

Query: 398 EKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQAN 457
            +T+ +T  +E ++      S+  +  ++     A    + +E  S  + + + ++ Q  
Sbjct: 410 SRTTEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVL 469

Query: 458 STNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLK 517
           S        +++   +  ++  ++ ++ +HA      ++   E S +L   + Q  S L 
Sbjct: 470 SHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLN 529

Query: 518 QLS 520
           Q +
Sbjct: 530 QFT 532