Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  157 bits (396), Expect = 1e-42
 Identities = 107/388 (27%), Positives = 187/388 (48%), Gaps = 11/388 (2%)

Query: 139 AGKNADLVGY--LVTEWGF--------DQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLL 188
           A +  D V Y  L   WG+        D V  +  Q  +   +  +G LLV LI +  L+
Sbjct: 165 AEQPVDKVSYVKLFKPWGWIIGTGIYVDDVNALVMQRLSSILVWVVGTLLV-LIVLASLI 223

Query: 189 QRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKD 248
            R++  P  +       +A G  DL+ ++     +EL Q+A A + F  K+      I  
Sbjct: 224 GRSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITP 283

Query: 249 RIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASESLKQ 308
               VT  + ++ Q         ++Q   +    +  +Q   S + V +S + A ++   
Sbjct: 284 ITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHS 343

Query: 309 AVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLL 368
           A  ++   +  +    TQ Q L ++   T +    L ++ + V+ +L++IR +AEQTNLL
Sbjct: 344 ANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLL 403

Query: 369 ALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEES 428
           ALNAAIEAARAGE GRGFAVVADEVR LA +T ASTN++E ++ QL   ++++   M ++
Sbjct: 404 ALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQT 463

Query: 429 LVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHA 488
              +R      E    ++++    +    S NQ+    S QQ+   +++   L  +  H+
Sbjct: 464 QQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHS 523

Query: 489 RELLTDSATISEHSKELLRSASQTRSNL 516
            +    +  ++  S++L+ +      +L
Sbjct: 524 TQASAQANQVAAASEQLMENGQHLARSL 551