Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (368), Expect = 2e-39
 Identities = 108/356 (30%), Positives = 178/356 (50%), Gaps = 21/356 (5%)

Query: 169 AFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQL 228
           A  LS+  L+ T+IA+  L+ R  IAPL  +     A+A+G  DL++RI     +E+G +
Sbjct: 213 AIGLSVVGLVFTIIAVSVLVSRG-IAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDV 271

Query: 229 ANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQS 288
           A A + F+ K+      I+     V   + +++QQ  +  H +     E    VA   + 
Sbjct: 272 AKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEM 331

Query: 289 QDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKTATELNTQV 348
             + + V  + Y+ +++++ A +    ++ ++  A     +LV +   T+    +L+ Q 
Sbjct: 332 SATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQA 391

Query: 349 EKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVE 408
            K+T +L++I  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T  ST ++ 
Sbjct: 392 AKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIG 451

Query: 409 TLLTQL-SGYSRNLIGYMEESLVAARNCVAAIESGSNL--VDKAIIDVNQANSTNQNAVH 465
            +L  L  G S+ +           +  + +++   +L  + KA+  ++       +A  
Sbjct: 452 EMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASA-- 509

Query: 466 DSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLKQLSH 521
            +EQQ+ + E + + L                I +   EL  S  QT S    LSH
Sbjct: 510 -AEQQSAVAEDINQNL--------------VAIQQIVNELSESFKQTESVSASLSH 550