Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  134 bits (336), Expect = 1e-35
 Identities = 103/373 (27%), Positives = 178/373 (47%), Gaps = 28/373 (7%)

Query: 156 DQVQ-QVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLKVLCHALASGSCDLS 214
           D VQ + A QLR+ A ++ +G  L+  + +  L+ R++  PL +       +ASG  DL+
Sbjct: 180 DDVQAEFARQLRD-ASLVGVGIALLMALVVM-LIARSIARPLQEAVQAMGNIASGESDLT 237

Query: 215 SRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQ 274
            R++    +E+  L    + F  K++         + ++   +H + Q  G +  N    
Sbjct: 238 RRLDTHGSDEITHLGEHFNRFNGKLQGV-------VGQLQGAAHALAQSAGHVGDNAGAA 290

Query: 275 QSEISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQ-------TQN 327
           Q   +       Q   ++  VT ++   +++ +QA      ++ Q+   Q        Q 
Sbjct: 291 QQRSAQQSLQMDQVATAVNEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQI 350

Query: 328 QQLVEKAEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFA 387
            +L    +   +   +L     ++  +L +IRSIAEQTNLLALNAAIEAARAGE GRGFA
Sbjct: 351 DRLSLTIDEAVQVIRDLAGHSTRIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFA 410

Query: 388 VVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVD 447
           VVADEVR LA++T+ ST ++ T++  L   S   +  ++ S  A+R  V         +D
Sbjct: 411 VVADEVRLLAQRTAQSTAEIHTMIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASLD 470

Query: 448 KAIIDVNQANSTNQNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLR 507
                +N   + N +    + QQ+ +VE++              + D+A +S+ + +  R
Sbjct: 471 AINQVLNNLTALNASIASATLQQSHVVEEI-----------NRNVLDTAGLSQQTADAAR 519

Query: 508 SASQTRSNLKQLS 520
            +S     L +LS
Sbjct: 520 QSSDAGVALGRLS 532