Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  145 bits (366), Expect = 4e-39
 Identities = 125/453 (27%), Positives = 212/453 (46%), Gaps = 39/453 (8%)

Query: 84  NVYTFNAKGQVLYNA------KNTSDTATSLNQWVTQPPSDQAVRKNTDGHEGLLIIVPL 137
           + +  +A GQV+ +       KN  D     N  V     D  +    DG + ++   P+
Sbjct: 207 HAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAAGMQDVTL----DGQDRIISFAPV 262

Query: 138 KAGKNADLVGYLVTEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLN 197
               +A    Y+      D+     SQ R  A +  +   +  +  +  LL   L++PL 
Sbjct: 263 AGLPSAQW--YIGLSIDRDKAYAALSQFRTSAIIAML-IAVAAIAGLLGLLIPVLMSPLT 319

Query: 198 DLKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVS 257
            +      +A G  DL+ R+  +  +E G+LA + + F+ ++ ++ + +      V D+S
Sbjct: 320 TMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISEVSSATRLVHDLS 379

Query: 258 HKVEQQIGRLEHNI--HNQQSEISNSVA-----IGHQSQDSIKAVTESIYAASESLKQAV 310
            KV   +     +I    +QS  +NSVA     +G  +Q+  +   ++   AS + +QA 
Sbjct: 380 EKV---VSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQHASGASEQAH 436

Query: 311 TSSEDSKAQLREAQTQNQQLVEK-AEITTKTATELNTQVEKVTDILQMIRSIAEQTNLLA 369
              E  +  +      +Q++ E  A+I T     LN   +++  IL +I+ I++QTNLLA
Sbjct: 437 GGREVVEEAISAMTALSQRISESCAQIET-----LNASTDEIGKILDVIKGISQQTNLLA 491

Query: 370 LNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQLSGYSRNLIGYMEESL 429
           LNAAIEAARAGE GRGFAVVADEVR+LA +T  S  ++  ++T L   SR  +  M  S 
Sbjct: 492 LNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQ 551

Query: 430 VAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQQNRLVEQL---LEQLRLLDN 486
           V++   V         +      + + +  NQ+    +E+Q  +VE L   + Q+  L+ 
Sbjct: 552 VSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQ 611

Query: 487 HARELLTDSATISEHSKELLRSASQTRSNLKQL 519
              E L ++     H  +L + A +    LKQL
Sbjct: 612 QGVENLNETL---RHCDQLAQQAGR----LKQL 637