Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  153 bits (386), Expect = 2e-41
 Identities = 117/411 (28%), Positives = 201/411 (48%), Gaps = 38/411 (9%)

Query: 125 TDGHEGLLIIVPLKAGKNADLVGYLVTEWGFDQVQQVASQLRNQAFMLSIGFLLVTLIAI 184
           +DG   LL   P+    +A+   Y+      D+   + S  R  A + ++   +V +I +
Sbjct: 231 SDGQTRLLTFSPITGLPSANW--YIGLSVDKDKAFSMLSTFRTSAVIATV-VAVVIIIGL 287

Query: 185 YWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFRKDNELGQLANAIDDFIAKVESTFA 244
             LL R L+ PL+ +      +A G  DL+ R++    +E G L NA + F+ ++ S+  
Sbjct: 288 LGLLIRVLMQPLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGVLGNAFNRFVERIHSSIR 347

Query: 245 PIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISNSVAIGHQSQDSIKAVTESIYAASE 304
            +     +V +V+ +V          I    S ++NS    +++     A+ E   AA E
Sbjct: 348 EVSSATEQVNEVALRV----------ISASNSSMTNSDEQSNRTNSVAAAINELGAAAQE 397

Query: 305 SLKQAVTSSEDSKAQLREAQTQNQQLVEKAE---------ITTKTA--TELNTQVEKVTD 353
               A  +S+ + +    A+ + QQ+VE+           I T +A    LN++   +  
Sbjct: 398 IAGNAAQASQHASSARLLAE-EGQQVVERNIAAMNRLSDLIVTSSAHIETLNSKTVNIGQ 456

Query: 354 ILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKTSASTNQVETLLTQ 413
           IL++I SI++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T  S  QV+T++ +
Sbjct: 457 ILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEE 516

Query: 414 LSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTNQNAVHDSEQQNRL 473
           L   +R  +  ME+S   +++ +         +D   + + + +  NQ+    +E+Q  +
Sbjct: 517 LQVGARESVDTMEQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAV 576

Query: 474 VEQL---LEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLKQLSH 521
           VE +   + ++ +L+    E L          +  LR+ S       +L H
Sbjct: 577 VEAINMDINEINMLNQEGVENL----------QATLRACSDLEQQAGRLKH 617