Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  151 bits (381), Expect = 6e-41
 Identities = 106/364 (29%), Positives = 185/364 (50%), Gaps = 7/364 (1%)

Query: 158 VQQVASQLRNQAFMLSIGFLLVTLIAIYWLLQRTLIAPLNDLK-VLCHALASGSCDLSSR 216
           + QV S+ R   + L++  L++ ++    LL R L++ LN LK V+ H   +G  DLS+R
Sbjct: 132 LSQVFSE-RFANYALAVFVLMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTG--DLSAR 188

Query: 217 INFRKDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQS 276
           +     +E+GQ+ANA +   A  +     +     ++ D + ++   +  + H +  QQS
Sbjct: 189 VPLVGKDEVGQMANAFNAMQAGYQRVVTTVASTARQLDDGAARLASSMNDVRHGMLGQQS 248

Query: 277 EISNSVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEI 336
           E   +    ++   ++  + +   A  +  K A   +   +  +   Q     L    + 
Sbjct: 249 ETDQAATAINEMTATVYHIAQHAGATRDLSKTADGLAGSGQQVVARVQQSIAGLSSGVQQ 308

Query: 337 TTKTATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHL 396
           T +    L    +K+  ++ +I SIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+L
Sbjct: 309 TAEMIQRLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNL 368

Query: 397 AEKTSASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQA 456
           A++  AST+++  ++  L   +R+ + +M+ES   A +CV   +     + +    V Q 
Sbjct: 369 AKRVQASTDEITGMIAALQAGTRDAVDFMQESSYKADDCVQQAQEAGAALAEITGAVAQM 428

Query: 457 NSTNQNAVHDSEQQNRLVEQL---LEQLRLLDNHARELLTDSATISEHSKELLRSASQTR 513
             +N      +EQQ+++ E++   +  +R +  +  +   DSAT S     L  + ++  
Sbjct: 429 RESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTENTVQQTVDSATTSNELATLAGALNKAI 488

Query: 514 SNLK 517
             LK
Sbjct: 489 GQLK 492