Pairwise Alignments

Query, 521 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., Methyl-accepting chemotaxis protein McpU from Pseudomonas sp. DMC3

 Score =  149 bits (375), Expect = 4e-40
 Identities = 97/358 (27%), Positives = 171/358 (47%), Gaps = 2/358 (0%)

Query: 163 SQLRNQAF-MLSIGFLLVTL-IAIYWLLQRTLIAPLNDLKVLCHALASGSCDLSSRINFR 220
           +Q ++  F M  +G ++  + + + WL+   +  PL  +  +   +A G  DL+ R++  
Sbjct: 353 AQRKSDTFGMAMVGLIIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLSSD 412

Query: 221 KDNELGQLANAIDDFIAKVESTFAPIKDRIVEVTDVSHKVEQQIGRLEHNIHNQQSEISN 280
           + +ELG +A   + F+AK+++    +   +  V+D S        R    +  Q +EI  
Sbjct: 413 RSDELGSIAKGFNTFLAKLQAMITQVVTSVQSVSDSSEHTADIAIRTNIGVQKQMAEIDQ 472

Query: 281 SVAIGHQSQDSIKAVTESIYAASESLKQAVTSSEDSKAQLREAQTQNQQLVEKAEITTKT 340
                 +   + + V  +   A+++   A  ++      +R+       L  +     + 
Sbjct: 473 VATAVQEMTATAQDVARNATQAAQAASHADQAASQGMQIVRDTSNSIGVLAVEIGKAVEV 532

Query: 341 ATELNTQVEKVTDILQMIRSIAEQTNLLALNAAIEAARAGENGRGFAVVADEVRHLAEKT 400
              L    E +  IL  IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+KT
Sbjct: 533 VQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKT 592

Query: 401 SASTNQVETLLTQLSGYSRNLIGYMEESLVAARNCVAAIESGSNLVDKAIIDVNQANSTN 460
             +T ++++++ QL   +R+++  ME+S       V      +  ++     V+  N  N
Sbjct: 593 QKATEEIQSMIQQLQQGTRDVVRVMEDSQNRTDESVQHAAKAAEALETITQAVSVINDMN 652

Query: 461 QNAVHDSEQQNRLVEQLLEQLRLLDNHARELLTDSATISEHSKELLRSASQTRSNLKQ 518
                 +E+Q+ + + +   +  +   A E+   +   S  S  L + A Q R  + Q
Sbjct: 653 TQIASAAEEQSAVADDINRNVINIGQVANEVAGGADESSSASAGLTKLAEQQRRLINQ 710