Pairwise Alignments

Query, 244 a.a., IclR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., Transcriptional repressor IclR from Xanthobacter sp. DMC5

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 54/231 (23%), Positives = 105/231 (45%), Gaps = 9/231 (3%)

Query: 19  LMQVAVNPEPVSAKGLSEQLQVPLSSLYRHLKLLKEWNLIEESPHDKTLIIGPAALLLMR 78
           L++V  + + ++   ++ + ++P+S+++R L  L++  L+          +G     +  
Sbjct: 35  LLRVVADQDGMALAEIARRAELPVSTVHRLLTTLEKRQLVNHDLSTGLWTVGLGLFRIGS 94

Query: 79  SYETSQHNLDAVEAVLSRLQKQTGEMAAYMVPVGYRALCVSQRESMQALRCSFVQGQSQP 138
           +Y   +   D    V+ RL  +T E     +      + V+Q E+   +R  F  G   P
Sbjct: 95  AYLRIRKLPDIGRPVIRRLLHETDETVNLAMFDAMELVVVAQAEAHAPVRAFFRLGARLP 154

Query: 139 LLRGASSKVMLAYM-PAAR--CEKILRYFGEDPTLDKWQ----SEFEKIRRHGYAVSTSE 191
           L   A+ K +LA   P+ R  C   +RY        + +     +  +I   G+AV   E
Sbjct: 155 LHATAAGKAVLAAASPSFRGACLAQIRYEPFTTATRREERALMDDVSEILERGFAVDREE 214

Query: 192 IDPGVSGISAPVM-KGSKLIGAISVMAPAHRVESNK-QRIILHVLQAARAL 240
             PG+  ++A ++ +    IGA+SV  PA R+  ++ QR+   V+ AA  +
Sbjct: 215 HAPGMRAVAAAILNEWRDPIGAVSVSGPAVRMSEDRIQRLGRRVVAAAEQM 265