Pairwise Alignments

Query, 244 a.a., IclR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Transcriptional regulator, IclR family from Variovorax sp. SCN45

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 24/226 (10%)

Query: 17  QLLMQVAVNPEPVSAKGLSEQLQVPLSSLYRHLKLLKEWNLIEESPHDKTLIIGPAALLL 76
           QLL  +  +  P++ K L+ +  +  +  + ++       LIE+       ++GP AL L
Sbjct: 20  QLLRALVHHGRPMALKDLAREADMTAAKAHPYMVSFGRLGLIEQDRASGHYLLGPLALQL 79

Query: 77  MRSYETSQHNLDAVEAVLSRLQKQTGEMAAYMVPVGYRALCVSQRESMQALRCSFVQGQS 136
                     +     ++ +L +Q G   A  V     A  V   ES   +  +   G  
Sbjct: 80  GLISLQQADPVHIATPLIGQLAQQIGHTVALAVWGARGATIVRTAESPSPVHVNMRHGTV 139

Query: 137 QPLLRGASSKVMLAYMPAARCEKIL---------RYFGEDPT---------LDKWQSEFE 178
             L   AS +V   Y+ A     +L         R  GE P          L  W S+FE
Sbjct: 140 FSLTNTASGRVFATYLDAEVVRSLLEEERQRQKQRKGGEPPPPAGMPPVQPLPSW-SDFE 198

Query: 179 K----IRRHGYAVSTSEIDPGVSGISAPVMKGS-KLIGAISVMAPA 219
           +    +R HG + S  E+  GVS ++APV   +  ++ A++ + PA
Sbjct: 199 RQLKEVRDHGISRSDGEVIEGVSAMAAPVFDHTGAIVLAVTAIGPA 244