Pairwise Alignments

Query, 244 a.a., IclR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)

Query: 28  PVSAKGLSEQLQVPLSSLYRHLKLLKEWNLIEESPHDKTLIIGPAALLLMRSYETSQHNL 87
           P SA  + + L +P S+ Y  L  L+    +     +          L  R  E S H L
Sbjct: 25  PCSAATIIDTLGIPKSTAYLLLNELRRQRFLSLDHQENFC-------LWTRLVELSGHAL 77

Query: 88  DAVEAV------LSRLQKQTGEMAAYMVPVGYRALCVSQRESMQALRCSFVQGQSQPLLR 141
             ++        L++L   TG +    +     A  + + ES   +     +G+S  L R
Sbjct: 78  SKMDLRELARPRLTQLMDTTGLLCHLGIIDNGSAYYILKVESSATISVRSHEGKSLSLYR 137

Query: 142 GASSKVMLAYMPAARCEKILR---YFGEDPTL----DKWQSEFEKIRRHGYAVSTSEIDP 194
               K +LA+ PAA  + I+    +    PT      +   E  +IRR G++    E   
Sbjct: 138 SGIGKCLLAWQPAAVQQSIIEGLVWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYA 197

Query: 195 GVSGISAPVMK-GSKLIGAISVMAPAHRVESNKQ 227
            V  ++APV    ++L  AISV+    R++ N++
Sbjct: 198 DVRCVAAPVFNANNELTAAISVVGT--RLQINEE 229