Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  113 bits (282), Expect = 7e-30
 Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 12/298 (4%)

Query: 29  PICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFSSSTSLVVYS 88
           P+ L++ LG + +RI L +        ++ + V  PA+L +S V  K D S+   + V  
Sbjct: 10  PVFLIIALGAVLRRILLKDAAHWAALEKLTYFVLFPALLVVSAV--KADLSTVNVVAVAG 67

Query: 89  LIANMLFFL--FTLFSTRKLI-----DRPHDWGVITQGGFRANTAIIGLAYVANTYGNAG 141
            +   +  L    L   + LI     D P  +  + QG  R NT I+ LA     YG AG
Sbjct: 68  ALIGTVIILSGLILLMHKPLIAALAADGP-GFTSLFQGAVRWNTYIV-LAVAGGLYGAAG 125

Query: 142 VALAAIYVASTTVLFNIQAVIALTPRGESNGWQAGKLMFKTLTKNPLIISIVLGFLCYLA 201
           + +AA+ + +   + NI AV+ L      +       + + L +NP I +   G L  + 
Sbjct: 126 ITIAALALVAMIPVVNIIAVLVLASFSGRHP-PTFAYVAEQLARNPYIWACSAGALLNVT 184

Query: 202 SVPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKLILSPLLITG 261
             P+PK++ + G      +L L LL  GG L L+ LK  R   + +   KL+L P +   
Sbjct: 185 GFPVPKVLVEFGDILGKASLALGLLVVGGGLILDRLKRPRAIVFASLALKLLLKPAIALA 244

Query: 262 GAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVFSLFTCTL 319
            A   G RG +L ++ +  + P+A   YV+AR MGG+A L A I+ +  + +  T  L
Sbjct: 245 LALAFGLRGTELVVVAITAAVPSAPNGYVLARQMGGDAPLLAEILTIQIIGAAITLPL 302