Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., Auxin efflux carrier family protein from Variovorax sp. SCN45

 Score = 79.7 bits (195), Expect = 9e-20
 Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 17/303 (5%)

Query: 29  PICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFSSSTSLVVYS 88
           P+ L++  G L  R   I  N ++  S ++F +  PA+LF ++ +   +  S   +  Y 
Sbjct: 11  PVVLLIAAGYLAGRRRWIGGNAVKDLSNLIFLLLAPALLFRAMSTVHVEQLSLKPVAAYF 70

Query: 89  LIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAYVANTYGNAGVAL---- 144
           + + +LF       T  L        VI      +NT +IG+A +   YG  G+ +    
Sbjct: 71  IASGLLFA-----GTMALRGFNRTAAVIALANTYSNTVMIGIALIGLAYGEDGMVVLLTL 125

Query: 145 ----AAIYVASTTVLFNIQAVIALTPRGESNGWQA-GKLMFKTLTK---NPLIISIVLGF 196
               + + + S TV+  +         G+  G  +  + + + L     +P+ + I+ G 
Sbjct: 126 ISLHSLVLLTSATVVLELAVAREHAAAGDGTGKHSMARTVLRALRNAIIHPVPLPIMAGL 185

Query: 197 LCYLASVPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKLILSP 256
           L     + +P+++            P+AL+  G +L L  +      A      K +L P
Sbjct: 186 LFAQTGLVMPEMIDKPIQLLGQAFGPVALVMVGITLALTPIGRHWRGALAQALVKNLLHP 245

Query: 257 LLITGGAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVFSLFT 316
           LL+    W LG RG+ L ++ +  + P  A  ++ ++       L    +A++TV +L T
Sbjct: 246 LLVAAIGWALGVRGIPLTVMVVAAALPIGANVFLFSQRYRTAEDLVTASVAVSTVLALGT 305

Query: 317 CTL 319
            TL
Sbjct: 306 LTL 308