Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  120 bits (302), Expect = 3e-32
 Identities = 91/312 (29%), Positives = 142/312 (45%), Gaps = 11/312 (3%)

Query: 16  IIAQLQFSATITGPICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSK 75
           ++  L    T   PI L++ LG   +    + E+F   A R+ + V LP++    + ++ 
Sbjct: 8   MLTMLHLLLTTLLPIILLIALGTFLRLRGFLAESFWPGAERLSYYVLLPSLFLHGLATAN 67

Query: 76  HD----FSSSTSLVVYSLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLA 131
            D       + +L++ +L   +L  L+   +  +      D+  + QGG R N   IG  
Sbjct: 68  LDGIPVLGMAGALMLSTLAGAVLLMLYQGAANHE----GADFTSVFQGGIRFNN-YIGAT 122

Query: 132 YVANTYGNAGVALAAIYVASTTVLFNIQAVIALTPRGESNGWQAGKLMFKTLTKNPLIIS 191
             A  YG+AG+ALAA+  A+   L N+  V+        +   A  L  + +  NPLI+ 
Sbjct: 123 LAAGIYGSAGIALAAVANAAIVPLVNLLCVLVFARFSARHSSPATVL--RAIFANPLIVG 180

Query: 192 IVLGFLCYLASVPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYK 251
              G +     + +P  +           LPL LLC G +L   SL         A+ +K
Sbjct: 181 CAGGLVLRATGLGLPAGIDATVKALGQAALPLGLLCVGAALGGASLGQQVRPLMAASAFK 240

Query: 252 LILSPLLITGGAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTV 311
            ++ PL   G   L G  G    +  L  + PTA++SYVMAR MGGNA L A +IAL TV
Sbjct: 241 FLVMPLTTWGVCRLFGLSGQAAVVAVLFQALPTASSSYVMARQMGGNAPLMATLIALQTV 300

Query: 312 FSLFTCTLGIFL 323
            +  T  L + L
Sbjct: 301 AAAATLPLVLML 312