Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score =  223 bits (569), Expect = 4e-63
 Identities = 130/318 (40%), Positives = 192/318 (60%), Gaps = 8/318 (2%)

Query: 16  IIAQLQFSATITGPICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSK 75
           ++A L  +  IT P+  ML +GVL KRI+LI++NF  VAS++VF V +PA+LFL I  + 
Sbjct: 3   MLALLIQTLNITAPVFAMLFMGVLLKRIHLIDDNFNRVASQLVFNVCMPALLFLGIYHAD 62

Query: 76  HDFSSSTSLVVYSLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAYVAN 135
              +    +++Y ++A ++ F    +          D G+ TQG FR N  +IGLA  A+
Sbjct: 63  LAAAVKPGVILYFIVATLVGFAIA-WGMAIWRSPMADRGIYTQGAFRGNNGVIGLALAAS 121

Query: 136 TYGNAGVALAAIYVASTTVLFNIQAVIAL---TPRGESNGWQAGKLMFKTLTKNPLIISI 192
            YG+ G++L A+      +++N  + + L   +P  +S+ W   K +F     NPLIIS+
Sbjct: 122 LYGDYGISLGAVLAGLVILMYNSLSAVVLAVYSPDLKSDPWSICKSIFS----NPLIISV 177

Query: 193 VLGFLCYLASVPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKL 252
           ++        VP+P  +  +G Y A MTLPLAL+C GG+L+L +L++    A  A+  K+
Sbjct: 178 LVAAPMAYGQVPLPNWLLTSGDYLAQMTLPLALICIGGTLSLAALRNCGRLAIDASFVKM 237

Query: 253 ILSPLLITGGAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVF 312
           +  PLL T GAWL GFRG +LG+LFL   +PTAAASYVMARA  GN  LAA+II +TT+ 
Sbjct: 238 LWLPLLGTLGAWLCGFRGAELGILFLYIGSPTAAASYVMARAANGNHELAASIIVITTLM 297

Query: 313 SLFTCTLGIFLLSSFGVI 330
           +  T  +GIF+L   G I
Sbjct: 298 AAITTNIGIFILQWGGWI 315