Pairwise Alignments

Query, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., putative transporter YfdV from Alteromonas macleodii MIT1002

 Score =  217 bits (553), Expect = 3e-61
 Identities = 120/311 (38%), Positives = 183/311 (58%), Gaps = 2/311 (0%)

Query: 20  LQFSATITGPICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFS 79
           L F  +   P+ ++L +G LF RI  +NE FIE  S++VF V LPA+LFLSI  +    +
Sbjct: 2   LSFITSTLIPVLILLLMGWLFFRIKWLNEGFIEAGSKLVFNVALPALLFLSIARADFSKA 61

Query: 80  SSTSLVVYSLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAYVANTYGN 139
           ++ SL+   ++  ++ F   + ++   +      GV+ QGGFRAN  IIGLAY ANTYG 
Sbjct: 62  ANLSLIGVGVMGTLIVFAALMITSHLTVHPYKARGVVVQGGFRANMGIIGLAYCANTYGQ 121

Query: 140 AGVALAAIYVASTTVLFNIQAVIALTPRGESNGWQAGKLMFKTLTKNPLIISIVLGFLCY 199
            G+A+A++Y+   T+LFN+ +V  L     ++    G++    + KNPLI+SI       
Sbjct: 122 EGLAVASVYMGCITILFNVLSVFVLNFYQGASRSLLGQV--TGMAKNPLILSIAAALPFS 179

Query: 200 LASVPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKLILSPLLI 259
                +P  +   G YFA +TLPLAL+CTG SL   S   D  +   +T  K ++ P ++
Sbjct: 180 YFEWQLPTTLIKTGEYFAQLTLPLALICTGASLQFRSFSSDWFNIVLSTTSKCVVYPTIL 239

Query: 260 TGGAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVFSLFTCTL 319
              A+  GFRG++LG++ L+  +PTAAASYVM R +GG+  LAA+IIA++T+ SL    L
Sbjct: 240 VAFAYAFGFRGMELGIVLLLAISPTAAASYVMVRNLGGDYRLAASIIAVSTLASLPITAL 299

Query: 320 GIFLLSSFGVI 330
              +LS   ++
Sbjct: 300 AFGILSKLQLV 310