Pairwise Alignments

Query, 346 a.a., fucose 4-O-acetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 43/307 (14%)

Query: 11  KIASLELGRVIAMLAIIALHCQLFTTYWFLDDE------PW-VAYLFNQSTRFAVPLFFL 63
           KI  ++  R IA L ++ +H    TT W++ +        W +A + N ++R +VPLFF+
Sbjct: 4   KIYWIDNLRGIACLMVVMIH----TTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFM 59

Query: 64  ISGYLIQPKLSHNPMQTLRNYCSPLLRIWVIWSVISLLMPFNLEVMVNQGYLAERSGYWG 123
           ISGYL   + S  P   LR     +    +    I+L    N+E+ +             
Sbjct: 60  ISGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKN----------- 108

Query: 124 FLLQHPLNSLFEGGLVHLWFLPALMIAVAIMALLIRQQKTHWMLPIAIGLYLYGEFAGSS 183
            LLQ P+         HLWF  A+ +   +  L+  Q K      + + + + G  A  +
Sbjct: 109 -LLQKPV-------FYHLWFFFAIAVIYLVSPLI--QVKNVGGKMLLVLMAVIGIIANPN 158

Query: 184 AV---VTG---MSAPIYTRNGPFFSTLFVVVGYLIRERHILWQSRSALLLAMLGMAFHFV 237
            V   + G   +   +Y     F+  L+ ++G  I       ++ S +  A+       +
Sbjct: 159 TVPQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFII 218

Query: 238 E---AYGLHQYGQVFNTNDYLFGTTLWAIGLFLFLLAKPDLG-RKPWGFSL-SQSILGFY 292
                Y L   G   +T     G  ++   + L  L K  L  R   G  L S+  LG Y
Sbjct: 219 SRGTLYELQWRGNFADTWYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIY 278

Query: 293 VSHLLVV 299
             H L++
Sbjct: 279 GFHALII 285