Pairwise Alignments

Query, 1085 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 996 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 48.9 bits (115), Expect = 2e-09
 Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 19/216 (8%)

Query: 13  TNDAQNPASACPFKQPLIGIIPVRYAFDVYDDQGQALHPLPKADRQWKGQFSIKQRSYTL 72
           TN + + A++ P     + I+PVRYA         A           +G  +++  +YTL
Sbjct: 2   TNASVSSATSGPACSARVPILPVRYAIVPRTADAPACRYADAGFNLEQGFPTLQHSAYTL 61

Query: 73  RQLRDGWLYVYDETAK----TLHEYEVVGCKLTKIDWSDDEANKPTHERGSKGESKSCL- 127
           R LR G++YV+ +  +     +HEY  VG  L K        +    ER   G+S   + 
Sbjct: 62  RALRPGYVYVFMKGPRGEKLVIHEY--VGAGLYKELRYQGLEDYHRRERYLSGQSTGWVW 119

Query: 128 ---LYPAQHTLSIGYAHQRWTWRVCEHMRSNTSSRHAVMRKVSLKQFESN----GTHPHA 180
                     + IGY+   WT  +   +  + + R   MR++ + +  S      T PH 
Sbjct: 120 ADTCQDTAEEVWIGYSPHLWTNAITARITGSAALRKRHMRQLDMAELVSGNQAPSTQPHV 179

Query: 181 HFAQYLEDYVADIGTPAEQDI----FKDTCTPSLPV 212
                L+ +V D   P E+ +      D  T +LP+
Sbjct: 180 LPVSALQTWVEDF-KPTERRMPLTWSSDPVTETLPI 214