Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 788 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  232 bits (592), Expect = 5e-65
 Identities = 170/521 (32%), Positives = 257/521 (49%), Gaps = 35/521 (6%)

Query: 13  LEDETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAELKLYRN 72
           L ++ L+ R  +G E LS           F +++ L S  + +    ++ K   L++ + 
Sbjct: 11  LAEDQLMFRSMNGTEGLSRL---------FDFEVDLLSPSAAIDLQSVLGKPLSLEI-KT 60

Query: 73  SQLVQRVHGIVRAFSQ-GDIGH--HHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSI 129
           +   + + G V  FS  G  G    HT Y+ ++ P+L  L+     RIFQ +TV E+L  
Sbjct: 61  AGAPRFLSGQVVRFSMIGREGRTSRHTVYRASVRPSLWYLTRTSGFRIFQNKTVVEMLEE 120

Query: 130 LLQEMGIHDYAFALKRDCVQR--EFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLY 187
           +  +   +D+AF  K     R  E C QY ESD  F+ RL   EG+ Y F HE  +HTL 
Sbjct: 121 VFAD---YDFAFEKKLTASYRQWEHCAQYNESDFAFVSRLMELEGIYYYFKHEQNEHTLV 177

Query: 188 FSDASDSLSKLP--EPIPYNALAGG-TMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYS 244
            +D   +   +P  E I Y A     T D   I       +       + D++F  P  S
Sbjct: 178 LADDIGAHEPMPGYETIDYFASDREVTEDIEVIDEWRVTGEVRTGRYTVDDFNFTTPG-S 236

Query: 245 FLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLR 304
            L  V+     +    Y+ ++  G Y +   G  ++++RL+  +     + G +    + 
Sbjct: 237 DLTNVRSQPQPHDHADYEMYEWLGEYTNAGEGEHYARVRLEEAQALGERSEGHATVRGMA 296

Query: 305 AGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEEG---GSGATTYNNQFSLIPGHLH 361
            GYKF ++       NR++++VS+ +      AL+E G   G     Y   F   P  L 
Sbjct: 297 PGYKFTMRGSAREEDNREYLIVSVAY------ALREGGYASGVEQGEYGFGFVAQPTSLP 350

Query: 362 WRAEPQPK-PQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQ 420
           +RA      P+  GP  A VVGPEG+EI+ D++GRVK+ F WDR    NE  SC+VRVSQ
Sbjct: 351 YRAPRVTSVPRTSGPQTAVVVGPEGKEIWTDQYGRVKVQFRWDRSGRRNENCSCFVRVSQ 410

Query: 421 GWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTE 480
            +AG  +G +  PRIG EVIV F+ G  D+PIITGR Y+  + PP+ LP   TK+ L T 
Sbjct: 411 VFAGDGFGAVFTPRIGQEVIVDFIGGLADRPIITGRVYNPRHMPPFDLPGEDTKSGLVTR 470

Query: 481 THQGEG---FNELSFEDQAGKEQIYLHAQKDFDGLIENDHT 518
           +  G      N L FED+ G E + LHA+++ +  +E D T
Sbjct: 471 STPGGSPATANSLVFEDRIGAEFVALHAERNLNVSVEADET 511