Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 884 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  234 bits (598), Expect = 1e-65
 Identities = 177/634 (27%), Positives = 280/634 (44%), Gaps = 57/634 (8%)

Query: 81  GIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGIHDYA 140
           GIV +F         +FY++ L P L   + R + R+FQ++TVPEI++ +L   G +   
Sbjct: 68  GIVTSFGLAQEDARRSFYKMRLRPWLWLATRRSDFRVFQERTVPEIITAVLARYG-YPME 126

Query: 141 FALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSD-ASDSLSKLP 199
             L+       +CVQY E D  F+ RL   EG+ + F HEA +H L F+D  + S   LP
Sbjct: 127 QKLRHSYRAWNYCVQYGEDDCSFIARLCEHEGIHFHFRHEADRHVLVFADDIAGSHGPLP 186

Query: 200 -------EPIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGT 252
                   P   + + GG      IH      +          + F+ P    L  ++  
Sbjct: 187 GGETVRYHPHEQSGMTGGPEPGERIHEWELVEEVRSGRHYRSHFDFEHPGAD-LSFMRRA 245

Query: 253 ELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQ 312
              ++   ++ ++ PG +    +G   ++IR +        A G+SN   L  G+   L 
Sbjct: 246 SPGHEHDDHELYEWPGNHVRHDDGETCARIRNEEQLSGRSRARGRSNLRELAPGHTMRLT 305

Query: 313 EHLDPAMNRDWVVVSIN-HQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWRA-EPQPKP 370
            H     NR ++++ ++ H  E  +A +  G +  +     F  +P    WR     PKP
Sbjct: 306 GHPRADQNRQYLLLGVSYHLRENLEASEGTGHAEGSFQRFAFDALPTSCAWRPPRTTPKP 365

Query: 371 QVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFI 430
           + DGP  A VVGP GEEI+ D +GRVK+ F WDR    +E +SCWVRVS  WAG+ +G  
Sbjct: 366 RTDGPQTALVVGPAGEEIWTDRYGRVKVRFHWDRLGRHDEHASCWVRVSTSWAGAAFGAA 425

Query: 431 AIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNEL 490
           A+PRIG EVIV FLNGDPD PIITGR ++A   P + LP     + +R+    G   N L
Sbjct: 426 ALPRIGQEVIVDFLNGDPDFPIITGRVHNADEMPAWQLPGQAHLSGIRSREPGGGRSNHL 485

Query: 491 SFEDQAGKEQIYLHAQKDFDGL-------IENDHTTVIRHDQHLTVENDQFTQIKHNQHL 543
           + +D  GK Q  L +      L       IE+         Q   +  D    I+ ++ L
Sbjct: 486 ALDDTNGKVQAQLRSDHQSSSLGLGHIARIEDTAGRKEDRGQGFELRTDGHGAIRASEGL 545

Query: 544 TVEGESR------------TLVKLDCSSEIGGSLQQKIGSKAIYDAGTE----VHLKAGN 587
            +  E+R            T+ +L     +   L +       ++AG +    + LKA +
Sbjct: 546 LITTEARGNAQAHIIDMGETVARLADGQALHERLSKAAREAKAHEAGDQDTVAMELKAQH 605

Query: 588 KLVLEAGNE-------------LTIKAGGSFIKVDAGGVHVVGSAINLNSGG---SAGSG 631
             +  +G +             L + +         G  H+V    N  + G   S  +G
Sbjct: 606 DEIRGSGGDPAQGVFPELQAPHLVLASPAGIQTAAEGSTHIVSDGHNALTSGAHTSVSAG 665

Query: 632 SGY------GGKMAELPQGVDKAKTPQEIELAAV 659
             +        +M  L +G+  A    +I+++A+
Sbjct: 666 KSFLVSARSAVRMVALDKGIRMAAAAADIDISAL 699