Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 791 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  230 bits (586), Expect = 2e-64
 Identities = 173/597 (28%), Positives = 273/597 (45%), Gaps = 77/597 (12%)

Query: 83  VRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGIHDYAFA 142
           VR    G +G H+  Y++TL      L+ R NSRI Q++ V E+L  + ++  I  +   
Sbjct: 79  VRFVRAGHVGRHYE-YRITLRSWFWLLTKRTNSRILQEKKVLEVLDAVFEDSPIKRFKKT 137

Query: 143 LKRDCV----QREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASD-SLSK 197
              + +     R +CVQ++ESD  FL RL  +EG+ Y F       T++ SDASD +  K
Sbjct: 138 RADNVIGTHNPRRYCVQHQESDYGFLSRLLEDEGIYYWFDAHGAPGTMHLSDASDIAHEK 197

Query: 198 LPEPIPYNALAGGTMDTPY------IHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQG 251
           LP     + +A    +  +      + G  + T    S    +D  FK      ++   G
Sbjct: 198 LPANDTLHHMATDASEARFNEVSRWVSGRQFGTGKHAS----RDSDFKA-----IKKKLG 248

Query: 252 TELD----YQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGY 307
            + D    ++    + F+ PG Y     G + +++R D LR         +  P + AG 
Sbjct: 249 ADADASGEHELASLEMFEFPGGYFTGDEGESRAKLRGDELRARRDRHWALTPWPDVAAGR 308

Query: 308 KFDLQEHLDPAMNRDWVVVSI----NHQGEQ-----------------PQALQEEGGSGA 346
            F  +   D   N ++++ +     +H+G +                  + L+++  +  
Sbjct: 309 GFKFEGDPDGTRNGEYIIAACTFVASHRGYEGVSASAASAARPVQAALAEVLRDDAVNAD 368

Query: 347 T--------------------TYNNQFSLIPGHLHWRAEP-QPKPQVDGPMIATVVGPEG 385
           T                    T     +++P    +RA    P+  + GP  A VVGP+G
Sbjct: 369 TLQVLEDLIAATPALAAGQPGTSAFLLTVMPADRPFRAPRLTPRVTMPGPQTAIVVGPKG 428

Query: 386 EEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVSFLN 445
           +E+  D+HGRVK+HF WDRY   +E+S+CWVRVSQ WAG  +G    PRIG EVIV FLN
Sbjct: 429 DELHVDDHGRVKVHFHWDRYDESDEKSTCWVRVSQPWAGKGWGGYFAPRIGQEVIVDFLN 488

Query: 446 GDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQIYLHA 505
           GDPD+PII GR Y+     P+            T       FNE  FED  GKEQ+YLHA
Sbjct: 489 GDPDRPIIMGRVYNDDQPIPFKSHTQSGFRTRSTPKGNAANFNEFRFEDDKGKEQVYLHA 548

Query: 506 QKDFDGLIE--------NDHTTVIRHDQHLTVENDQFTQIKHNQHLTVEGESRTLVKLDC 557
           +++ D  +E        +D T  + HD+ + ++ND+  ++  N+ +T+ G+    V  D 
Sbjct: 549 ERNLDVEVEADETRNVGHDRTKTVGHDEKVKIKNDRTEEVTGNETITIHGKRELTVDKDQ 608

Query: 558 SSEIGGSLQQKI-GSKAIYDAGTEVHLKAGNKLVLEAGNELTIKAGGSFIKVDAGGV 613
              I  +  +++ G K+ +  G      + N      GNE TI   G+      G V
Sbjct: 609 YVTIKTNHSEEVTGWKSTWVTGNHRLSTSANHDQTVQGNE-TIDVSGTRSDTVVGAV 664