Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 1057 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  276 bits (707), Expect = 3e-78
 Identities = 207/696 (29%), Positives = 325/696 (46%), Gaps = 76/696 (10%)

Query: 16  ETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAELKLYRNSQL 75
           E L  R   GQE +S           F ++++L S + N+   +M+ +   +++     L
Sbjct: 13  ERLKFRSMTGQERISAL---------FEHRVRLISDMPNIQPRRMLGEDMSIEV----NL 59

Query: 76  VQRVHGIVRAFSQGDIGHHH---------TFYQLTLVPALERLSLRHNSRIFQKQTVPEI 126
              + G  + F  G +               Y+ TL P L   + R + +IFQ +T P+I
Sbjct: 60  ATELGGAGKRFLSGQVTRFAYVGKDDGDMCVYEATLRPWLWYATRRSDFKIFQFKTAPQI 119

Query: 127 LSILLQEMGIHDYAFALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTL 186
           L  +L   G    A  L  +    ++CVQY ESD +F+ RL  +EG+ Y F H  G H L
Sbjct: 120 LQEVLAPYGFAIDA-RLSGNYRTWDYCVQYSESDFNFVSRLMEQEGIYYFFSHAQGSHQL 178

Query: 187 YFSDASDSLSKLPE---PIPYNA--LAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKP 241
              D +DS + +P     +PY+A  LA   ++  +I   ++            DY F+KP
Sbjct: 179 VLCDGADSHTPVPSGPVKVPYHAGVLAAQILEQDFIDSWSHSEDIASGNFAADDYDFRKP 238

Query: 242 AYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEP 301
               + TV+     + +  ++ +D PG Y +  +G  ++++RL+ L       + + N  
Sbjct: 239 NAE-IDTVRQQPAGHSRDDFEIYDWPGGYTELGDGENYARLRLEQLAGRRELVSAEGNLR 297

Query: 302 LLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEEGGSGA--------TTYNNQF 353
            +  GY F+L  H +   NR +++ ++ +  ++  AL+  G + A        T+Y   F
Sbjct: 298 HMAPGYLFELARHPNAEDNRRYLIEAVTYDFQE-NALRVAGAADAAYSESTSSTSYRQTF 356

Query: 354 SLIPGHLHWR-AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQS 412
            ++P    +R A   P+P+  GP  A VVGP GEEI  DE+GR+K+ F WDRY   +E S
Sbjct: 357 EVLPDSAPFRPARVTPRPRTTGPQTAVVVGPAGEEIHTDEYGRIKVQFHWDRYGRRDENS 416

Query: 413 SCWVRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHK 472
           SCW+RVSQ WAGS YG + IPRIG EVIV FLNGDPD PI+TG  Y+A   PP+ LP HK
Sbjct: 417 SCWIRVSQTWAGSNYGAMHIPRIGQEVIVDFLNGDPDYPIVTGCVYNAAQMPPWELPRHK 476

Query: 473 TKTVLRTETHQGEGFNE-LSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRH-----DQH 526
           T+T  +T   +G G    L FED  G E I L            DH     H     +Q 
Sbjct: 477 TQTGFQTNWSKGGGGKHMLRFEDSRGTEHIEL----------STDHGNTHLHMGYLMNQG 526

Query: 527 LTVENDQFTQIKHNQHLTVEGESRTLVKL--------------DCSSEIGGSLQQKIGSK 572
             V+     +++ N+  ++  +   L+                D    +G +L Q   S 
Sbjct: 527 SGVQRSYGFELRTNEWGSIRADKGLLLTTYTQDYAQRTSRDNPDGHEHMGATLAQ---SN 583

Query: 573 AIYDAGTEVHLKAGNKLV--LEAGNELTIKAGGSFIKVDAGGVHVVGSAINLNSGGSAGS 630
           A+  A  +  + A   LV  +  G   T+      ++  AGGV    +A+       AG 
Sbjct: 584 ALMQASGQA-IAATKALVGAMAQGKNQTLMGLVQGVQA-AGGVSQAVAALAAGGAPEAGV 641

Query: 631 GSGYGGKMAELPQGVDKAKTPQEIELAAVTPTQQSM 666
                  MA+  Q +D ++   +  ++ V+P  Q+M
Sbjct: 642 SDNPDPAMADAQQMLDLSRKIDKPVVSIVSPEGQTM 677