Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 906 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  259 bits (662), Expect = 4e-73
 Identities = 188/625 (30%), Positives = 298/625 (47%), Gaps = 67/625 (10%)

Query: 16  ETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAELKLYRNSQL 75
           E L  R   G+E+LS           + + ++L S  + +    ++ + A + +   S  
Sbjct: 3   EALQFRKLVGREALSRL---------YAFDVELLSNSNGIDPKALLGRPATVAMQTESGG 53

Query: 76  VQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMG 135
            + + GI   F  G+     +FY++TL P L   +LR + RIFQ ++VP+IL+ +L   G
Sbjct: 54  TRYLSGIASFFGLGEEDARQSFYRMTLRPWLWLATLRSDFRIFQNKSVPDILTEVL---G 110

Query: 136 IHDYAFA--LKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASD 193
            + YA    L R+    ++CVQY ESD  ++ RL   EG+ Y F HE  +H L F+D   
Sbjct: 111 GYGYAMEQRLSREYRAWDYCVQYHESDFSYVSRLCELEGIGYYFRHEEHRHVLVFAD--- 167

Query: 194 SLSKLPEPIPYNALAGGTM--DTPYIHGLTYRTQAEVSEVQLK---------------DY 236
            ++   EP+P     GGT+        G+T  ++A   E   +               DY
Sbjct: 168 DIAASHEPLP----GGGTVRFHPSETSGMTSGSRASPGERIYEWKSGEEMRSGFHFTDDY 223

Query: 237 SFKKPAYSFL---QTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHT 293
            F KP+       Q   G   DY    ++ ++ PG YK   +G  +++IR +        
Sbjct: 224 DFLKPSADLSGQRQAPAGHTHDY----FERYEWPGGYKQHEDGEVYTRIRTEEQHSERCL 279

Query: 294 ATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEEGGSGATTYNNQF 353
           A+G+SN+  L  G+ F+L  H     NR +++ S+ ++ ++     E  G G+      F
Sbjct: 280 ASGRSNKRELAPGHVFELANHPRQDQNRKYLLTSVEYELQENMQASEGAGEGSVQ-RFAF 338

Query: 354 SLIPGHLHWRAEPQP-KPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQS 412
              P    WR      KP+  GP  A VVGP+ EE + D HGRVK+ F WDR    NE S
Sbjct: 339 EAQPADHAWRPRRVTLKPRTRGPQTAIVVGPKNEETWTDRHGRVKVEFHWDRLGARNENS 398

Query: 413 SCWVRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHK 472
           SCWVRVS GWAG  +G  A+PR+GHEV+V FLNGDPD PIITGR ++A N P + LPE  
Sbjct: 399 SCWVRVSMGWAGDTFGTAALPRVGHEVVVDFLNGDPDCPIITGRVFNAANMPAWRLPEQA 458

Query: 473 TKTVLRT---ETHQGEGF------NELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRH 523
             + +R+     + G G       N L  +D  GK Q  L +      L    H   I  
Sbjct: 459 NLSGMRSRELNANDGPGHAGGSRGNHLVLDDHPGKIQAQLKSDHLCSSL-SLGHIGRIDG 517

Query: 524 DQHLTVENDQFTQIKHNQHLTVEGESRTLVKLDCS-------SEIGGSLQQKIGSKAIYD 576
            +  T +  +  +++ + H +V      L+  +         ++IG ++ +   ++ +++
Sbjct: 518 TEGRTDDRGEGAELRTDGHASVRAAKGLLLTTEARPGAQAHITDIGETVARLTAARDLHE 577

Query: 577 AGTEVHLKAGNKLVLEAGNELTIKA 601
             ++    A   +  EAG++  + A
Sbjct: 578 RQSQT---AQEAMAHEAGDQDAVTA 599