Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 1016 a.a., type VI secretion system tip protein TssI/VgrG from Variovorax sp. OAS795

 Score =  161 bits (408), Expect = 1e-43
 Identities = 148/589 (25%), Positives = 248/589 (42%), Gaps = 43/589 (7%)

Query: 42  FRYQMQLASRVSNLTADQMVDKRAELKLYRNSQLVQRVH--GIVRAFSQGDIGHHHTFYQ 99
           +R+++ L S  + +   +MV   A+L++       +     G++  F Q       TFY+
Sbjct: 41  YRFELVLVSDDAAIDFAKMVGSGAQLRILAPDDHTRATPYAGMLAEFDQLHQAGGFTFYR 100

Query: 100 LTLVPALERLSLRHNSRIF-QKQTVPEILSILL---QEMGIHDYAFALKRDCVQREFCVQ 155
             LVP L +LSL  NS ++  +QT+PEI+  LL   +     DY   L        +  Q
Sbjct: 101 AVLVPRLWQLSLYRNSEVYLNEQTIPEIVESLLVGARFSASRDYTLKLTGTYRPHSYVCQ 160

Query: 156 YRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNALAGGTMDTP 215
           Y+E+ + F+ R    EG+ Y F  + G   L   D  D +++  E +  N      +D  
Sbjct: 161 YQETPLAFVSRSFEREGIYYYFEQDGGVDRLVLLD--DKVAQPAEALAVNYRPADELDVG 218

Query: 216 Y----IHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ------GTELDYQQTRYQHFD 265
                +     R++     + L+DY+ ++         +      G E+ Y +       
Sbjct: 219 LAPDSVQAFVCRSRMLPRTLVLQDYNHRRANLPLEVKAEVSASGLGEEMLYGEN------ 272

Query: 266 APGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVV 325
               ++ +  G  ++ IR + LR  A   +G++    LR+G+   L  H     N  ++V
Sbjct: 273 ----FRSEEEGQRYATIRAEELRCGARVFSGEATAVGLRSGHFMVLSHHYRADFNGRYLV 328

Query: 326 VSINHQGEQPQALQE-------EGGSGATTYNNQFSLIPGHLHWR-AEPQPKPQVDGPMI 377
             I H+G Q  AL +       EG    T+Y N F  +P    +R A   PKP+V G M 
Sbjct: 329 TEITHEGSQAGALLDGLKTPFNEGERQTTSYRNSFVALPAATQFRPARTTPKPRVSGTMN 388

Query: 378 ATVVGP-EGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIG 436
           AT+     GE    D +G+ K+  P+DR   G  + S  +R++  +AGS +G       G
Sbjct: 389 ATIDAEGSGEYAELDAYGQYKVQIPFDRTEKGAAKGSRPMRMASPYAGSDHGMHFPLHKG 448

Query: 437 HEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQA 496
            EV++SF++GDPD+P+I G   ++ N        +   +++RT     +G NE+ F+D  
Sbjct: 449 AEVLLSFVDGDPDRPVILGAVPNSDNRSVVD-STNPQLSMIRT-----KGGNEIGFDDTR 502

Query: 497 GKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIKHNQHLTVEGESRTLVKLD 556
           G E I+L +      L      +V+          D+  +        V    +      
Sbjct: 503 GNEGIWLRSPYQDSALFIGCAASVLGSSAAPASSGDKAAKGAAPSPTPVGNIFQATKGGS 562

Query: 557 CSSEIGGSLQQKIGSKAIYDAGTEVHLKAGNKLVLEAGNELTIKAGGSF 605
            +   G +     GSK +   GTE  L A     +  G  L I     F
Sbjct: 563 DTVTFGNANVMNFGSKNLLSLGTEASLVASLANKVTMGASLNINMANEF 611