Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 859 a.a., type VI secretion system tip protein TssI/VgrG from Variovorax sp. OAS795

 Score =  189 bits (481), Expect = 4e-52
 Identities = 140/455 (30%), Positives = 199/455 (43%), Gaps = 55/455 (12%)

Query: 95  HTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGIHDYAFALKRDCVQ----R 150
           H  Y+LTL P L   +L  + RIFQ ++   IL  LL      DYAF + +  ++    R
Sbjct: 118 HVQYKLTLRPWLHLATLSTDCRIFQNKSAIHILDELLA-----DYAFPVDKRLIETYPSR 172

Query: 151 EFCVQYRESDIDFLHRLAAEEGLVYSFVHEA-------GKHTLYFSDASDSL----SKLP 199
           ++  Q+ ESD  F  RL  E G+ Y F H A       GKH L   D   +     S   
Sbjct: 173 DYQTQFNESDFAFFSRLTQEWGISYFFEHSATEGASGPGKHRLVLIDNMGAYKHNDSAAY 232

Query: 200 EPIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQ-------TVQGT 252
             + Y+A  G   D  Y+H           +   +DY + +P     Q       T Q  
Sbjct: 233 REVQYHA-PGWKTDAEYLHSFVPANHLTSGQYASRDYDYTRPKADLTQGRKDPRPTGQAD 291

Query: 253 ELDYQQTRYQ---HFDAPGRYKDDVN-----GAAFSQIRLDYLRRHAHTATGQSNEPLLR 304
              YQ    Q   H+  P       N     G   + +R+  LR H   A    N   + 
Sbjct: 292 AEVYQWHAGQAGSHYAQPKAGSAQANDPQAEGRQLALLRMQALRTHGARAQASGNLRGMV 351

Query: 305 AGYKFDLQEHLDPAMNRDWVVVSINHQGE---QPQALQEEGGSGATTYNNQFSLIPGHLH 361
            G  F LQ+H     N +++++      E   Q   ++E        +  +        H
Sbjct: 352 PGCTFRLQKHPRQQANAEYLILDTRLMIEDVAQDSQIREAADGRKQHWKVEVDFTA---H 408

Query: 362 WRAEP------QPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCW 415
             +EP      Q KP   GP  A VVGPEG+ ++ DE GR+K+ FPWDR    N+ S+CW
Sbjct: 409 PMSEPLRPALTQAKPFTHGPQTALVVGPEGQNLWTDELGRIKVQFPWDRIGQKNQHSTCW 468

Query: 416 VRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKT 475
           +RV+  WAG+Q G + +PRIG EVIV  + GDPD P+ TGR ++ +N PP+ LP     +
Sbjct: 469 LRVASPWAGNQLGGVQLPRIGQEVIVDCIGGDPDLPVCTGRVHNQSNLPPWALPGQSALS 528

Query: 476 VLRTETHQGEG-------FNELSFEDQAGKEQIYL 503
             R+     EG        N L  +D   K Q+ L
Sbjct: 529 GFRSRELTKEGGNSAAGRSNHLILDDTESKIQVQL 563