Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 1012 a.a., type VI secretion system tip protein TssI/VgrG from Variovorax sp. OAS795

 Score =  240 bits (612), Expect = 3e-67
 Identities = 175/570 (30%), Positives = 264/570 (46%), Gaps = 53/570 (9%)

Query: 83  VRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGIHDYAFA 142
           VR    G +G H   Y++TL      L+ R NSRI Q++ V +++  + ++  I  +   
Sbjct: 79  VRFVRAGHVGRHFE-YRITLRSWFWLLTKRANSRILQEKPVLDVIDAVFEDSPIKRFK-K 136

Query: 143 LKRDCV-----QREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSL-S 196
            K D V      R +CVQ++ESD  F+ RL  +EG+ Y F       T++ SDASD    
Sbjct: 137 TKADNVIGTHNPRRYCVQHQESDYQFISRLLEDEGIYYWFDAHDAPGTMHLSDASDMAHE 196

Query: 197 KLPEPIPYNALAGGTMDTPY--IHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTEL 254
           KLP             +  Y  I            +   +D  FK         +  ++ 
Sbjct: 197 KLPVEGTLRHAGTDASEARYNEISRWVSARHFHTGKQDSRDSDFKAIKKKLGAAIDVSD- 255

Query: 255 DYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEH 314
           D++    + F+ PG Y    +    +++R D L  H       +N P + AG  F  +  
Sbjct: 256 DHELAGLEVFEFPGGYFTGDDAENRAKLRGDELNAHRDRHWALTNWPDVAAGRSFKFEGD 315

Query: 315 LDPAMNRDWVVVSI----NHQG---------EQP-------------------QALQEEG 342
            D A + D+++ +     +H G         EQP                   Q L+E  
Sbjct: 316 PDGARDGDYIIAACTFMASHPGYESVAGSAVEQPIYTALSEALHDDAVNADTLQVLEELI 375

Query: 343 GSGATTYNNQ-------FSLIPGHLHWRAEP-QPKPQVDGPMIATVVGPEGEEIFCDEHG 394
            S  T +  Q        ++IP    +RA    P+  + GP IA VVGP+G+E   D+HG
Sbjct: 376 ASTPTLHTAQPGTSAFLLTVIPVDRPYRAPRLTPRVTMPGPQIAIVVGPKGDEYHVDDHG 435

Query: 395 RVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIIT 454
           RVK+HF WDRY   NE+S+CWVRVSQ WAG  +G   IPRIG EVIV FLNGDPD+PII 
Sbjct: 436 RVKVHFHWDRYDESNEKSTCWVRVSQPWAGKGWGGYFIPRIGQEVIVDFLNGDPDRPIIV 495

Query: 455 GRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIE 514
           GR Y+     PY  P         T       +NE+ FED+ G+E I +HA+++    +E
Sbjct: 496 GRVYNDDQPIPYKSPSQSGFKTRSTPGGGSSNYNEIMFEDKKGEENINIHAERNMSRSVE 555

Query: 515 NDHTTVIRHDQHLTVENDQFTQIKHNQHLTVEGESRTLVKLDCSSEIGGSL-QQKIGSKA 573
            D +T +  DQ +TV+ DQ   +  ++  TV      +V +D  + + G    Q +G++ 
Sbjct: 556 LDDSTTVDRDQSVTVKRDQTNHVDRDRKSTVTRNDTNMVAVDQKNTVKGKQNNQVVGNRD 615

Query: 574 IY-DAGTEVHLKAGNKLVLEAGNELTIKAG 602
            + DA   + +   +K  +      T +AG
Sbjct: 616 TFVDANDSLTVGGTHKTDVTGARTDTSRAG 645