Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  288 bits (737), Expect = 5e-82
 Identities = 191/623 (30%), Positives = 318/623 (51%), Gaps = 46/623 (7%)

Query: 15  DETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAELKLYRNSQ 74
           ++  ++  F G E LS           + + + L S+ S++    ++  +A +++  ++ 
Sbjct: 27  NDEFLLEHFSGTEELSKL---------YEFDLALLSQQSDVKLKSLIGSQATVEIELSNG 77

Query: 75  LVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEM 134
             + ++G V+ FS       +  Y   L P L  L+ R ++RIFQ+++V  ++S +    
Sbjct: 78  SFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGF 137

Query: 135 G-IHDYAFALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASD 193
           G +  Y F + +      +  QYRESD +F+ RL   EGL Y F H A  H +  +D S 
Sbjct: 138 GTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSS 197

Query: 194 SLSKLPEP--IPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQG 251
           +L  LPE   I Y++ A  T     I       Q +  ++ ++ + +++P      T+Q 
Sbjct: 198 TLLPLPEQPQIRYHS-ASVTETADSITQWQSTRQLQSGQIAVRTFDYRQPRNFLPVTMQS 256

Query: 252 TELDYQQTRYQHFDAPGRYKDDV--NGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKF 309
                   R++ +D PG+Y      +G A  + R++ L     T  G+SN   ++ GY F
Sbjct: 257 LNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGESNCRAMKPGYTF 316

Query: 310 DLQEHL----DPAMNRDWVVVSINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWRAE 365
           +L +H       A NR ++++S+ H+G       ++ G     Y N+F  +   + +R +
Sbjct: 317 ELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAG-----YVNRFVCVRKKIAYRPQ 371

Query: 366 PQP-KPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAG 424
               KP ++GP  A VVGP GEEIF DE GRVK+ F WDR    N+QSSCWVRV+Q  A 
Sbjct: 372 LNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSSCWVRVAQSGAS 431

Query: 425 SQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG 484
             +G I IPR+G EV+V FL+G+PD+P+I G  Y++TNTPP++LP +KT++   T + +G
Sbjct: 432 GGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKTQSGFLTRSMKG 491

Query: 485 EG--FNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIKHNQH 542
           +G   N   FED+AG EQI +HA+++ D  IE D T    HD            + +N+ 
Sbjct: 492 DGGTANFFRFEDKAGAEQIIMHAERNMDTEIELDET----HD------------VGNNRS 535

Query: 543 LTVEGESRTLVKLDCSSEI-GGSLQQKIGSKAIYDAGTE-VHLKAGNKLVLEAGNELTIK 600
           +TV G     VK D   ++  GS   ++ ++ I  A  + + L+ G+  +      + IK
Sbjct: 536 ITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVAAKQHIILQVGDSSITLTPEGIEIK 595

Query: 601 AGGSFIKVDAGGVHVVGSAINLN 623
            G   +        + G+A+ +N
Sbjct: 596 -GKVIVTTSTDTTQITGAAVRIN 617