Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., type VI secretion system tip protein VgrG from Pseudomonas sp. SVBP6

 Score =  326 bits (836), Expect = 2e-93
 Identities = 198/606 (32%), Positives = 311/606 (51%), Gaps = 22/606 (3%)

Query: 42  FRYQMQLASRVSNLTADQMVDKRAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLT 101
           F Y++QL S  S +  +Q++ K   L L       +  HGIV   SQ         Y++T
Sbjct: 36  FDYELQLTSDNSAIDLNQLLGKPMSLSLQLELGRSRYFHGIVARCSQSIDRGQFASYRVT 95

Query: 102 LVPALERLSLRHNSRIFQKQTVPEILSILLQEMGIHDYAFALKRDCVQREFCVQYRESDI 161
           L P L  LS   + RIFQ Q++P+I+  + +++G  D+  +L R   + E+CVQYRE+  
Sbjct: 96  LRPWLWLLSKTSDCRIFQNQSIPQIIKQVFRDLGFSDFEDSLSRPYREWEYCVQYRETSF 155

Query: 162 DFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLP--EPIPYNALAGGTMDTPYIHG 219
           DF+ RL  +EG+ Y F HE  +H L  +DA  +   +P  E +PY    G   +  +++ 
Sbjct: 156 DFVSRLMEQEGIYYYFRHEKDRHVLVLADAYGAHQVVPGYESVPYFPPDGQHRERDHLND 215

Query: 220 LTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAF 279
                + +   ++L DY F++P+ + +         +    Y  +D PG Y    +G  +
Sbjct: 216 WHLAQEVQSGSLELNDYDFQRPS-ARIDVRSEMPRPHTAGDYPLYDYPGTYVQSEDGEHY 274

Query: 280 SQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQ 339
           ++ R++ L+        + N   L AG  F +        NR++++V   +   Q + L+
Sbjct: 275 ARTRIEALQSLHERIELRGNARGLAAGNLFSMSGFSRQDQNREYLIVGARYYVVQ-ERLE 333

Query: 340 EEGGSGATTYNNQFSLIPGHLHWRAEPQP-KPQVDGPMIATVVGPEGEEIFCDEHGRVKI 398
             GG G   + +  S I     +R      +PQV GP  A VVGP GEEI+ D++GRVK+
Sbjct: 334 TGGGGGNAQFESNLSCIDAQQSFRPLASTLRPQVRGPQTAIVVGPAGEEIWTDQYGRVKV 393

Query: 399 HFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTY 458
           HF WDR+   NE SSCW+RVSQ WAG  +G + IPRIG EVIVSFL GDPD+PIITGR Y
Sbjct: 394 HFYWDRHDQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVY 453

Query: 459 HATNTPPYTLPEHKTKTVLRTETHQG---EGFNELSFEDQAGKEQIYLHAQKDFDGLIEN 515
           +A  T PY LP + T++ +++ + +G     FNE+  ED+ G EQ+Y+HA+++ D  +EN
Sbjct: 454 NAEQTVPYDLPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLYIHAERNQDIEVEN 513

Query: 516 DHTTVIRHDQHLTVENDQFTQIKHNQHLTVEGESR-TLVKLDCSSEIGGSLQQKIGSKAI 574
           D +  + H+++  V+  +   I         GE R   VK D    +G +    I    +
Sbjct: 514 DESHWVGHNRNKVVDFSEVATI---------GEDRIRAVKRDDILLVGSTKTDSISRSYL 564

Query: 575 YDAGTEVHLKAGNKLV-LEAGNELTIKAGGSFIKVDAGGVHVVGSAINLNSGGSAGS--- 630
            + G  + L  G  ++ L A  ++ +         +       G  ++LN GG  G+   
Sbjct: 565 IEVGENLRLVCGKSILELNASGQINLTGVQFNFNAEGNAQFNTGGTLDLNIGGGPGATPD 624

Query: 631 GSGYGG 636
           G G  G
Sbjct: 625 GQGVKG 630