Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., type VI secretion system tip protein VgrG from Pectobacterium carotovorum WPP14

 Score =  537 bits (1383), Expect = e-157
 Identities = 284/622 (45%), Positives = 387/622 (62%), Gaps = 20/622 (3%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDK 63
           L ++++V  L   T  V  F   E+L+           F   + LAS +  +    ++D+
Sbjct: 7   LQFTVKVGALPASTFSVVDFQLSEALNQP---------FALSLNLASPLPGIDFGAVLDQ 57

Query: 64  RAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTV 123
             EL ++   +L +RV GI+ AF+QGD G   T YQ  + PAL RL LR N+RIFQ Q  
Sbjct: 58  PCELLVWYEGELQRRVSGIISAFAQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQAQKP 117

Query: 124 PEILSILLQEMGIHDYAFALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGK 183
             I+  LL+E GI DYAFAL+ +   RE+CVQYRESD+ F+ RL AEEGL +    E GK
Sbjct: 118 EAIIGALLEEAGITDYAFALRNEHAVREYCVQYRESDLAFITRLVAEEGLYFFHEFEEGK 177

Query: 184 HTLYFSDASDSLSKLPEPIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAY 243
           H L F+D + +L+K PE + +N    G  +  Y+    Y      +EV LKDYSFK PAY
Sbjct: 178 HRLVFADDAGALAKGPE-LFFNLATQGLSEGAYVRRFRYAEAVRTAEVALKDYSFKTPAY 236

Query: 244 SFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLL 303
             L      EL++Q+  YQHFD PGR+K D +G AF+  RLD LR  A T +G+SN   L
Sbjct: 237 GLLHNKMSGELEHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGSGESNAAEL 296

Query: 304 RAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWR 363
             G  F L EH + A+N  W +V+I H G+QPQAL+EE G   TTY+N F ++     WR
Sbjct: 297 MPGSSFTLTEHPNLALNIGWQLVAITHSGQQPQALEEESGGEPTTYSNSFEVVKASTTWR 356

Query: 364 AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWA 423
           A+   KP VDGP IATVVGP GEEI+CD++GRVK+ FPWDRY   ++QSSCWVRVSQGWA
Sbjct: 357 ADLPYKPMVDGPQIATVVGPAGEEIYCDQYGRVKLQFPWDRYGASDDQSSCWVRVSQGWA 416

Query: 424 GSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ 483
           G QYG IAIPRIGHEVIVSFL GDPDQPI+TGRT+HATN  PY LP +KT+T +RT TH+
Sbjct: 417 GGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSIRTSTHK 476

Query: 484 GEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIKHNQHL 543
           G GFNEL FEDQAG+E++++HAQKD + ++ N+ +T +  D +  +  DQ   ++ NQ +
Sbjct: 477 GAGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTSVNVDHNENIGRDQTVVVQQNQTV 536

Query: 544 TVEGESRTLVKLDCSSEIGGSLQQKIGSKAIYDAGTEVHLKAGNKLVLEA-GNELTIKAG 602
           +V  +  T ++ + +  +     +K  S  + D  T   L+  N + + A    + I  G
Sbjct: 537 SVIADQITEIQGEQTVVV-----KKNRSTVVEDNET---LRVTNDIFIHAEDGSIQIGTG 588

Query: 603 GSFIKV-DAGGVHVVGSAINLN 623
             +I +  +G + +VG+ + LN
Sbjct: 589 AGYISIKHSGDIEIVGNNLTLN 610