Pairwise Alignments

Query, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 846 a.a., Rhs element Vgr protein from Enterobacter asburiae PDN3

 Score =  284 bits (726), Expect = 1e-80
 Identities = 189/590 (32%), Positives = 294/590 (49%), Gaps = 34/590 (5%)

Query: 92  GHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQE--MGIHDYAFALKRDCVQ 149
           G  +  YQLT+ P L  +    N RIFQ QTVP+I+  LL E  + + D      R    
Sbjct: 83  GTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKTLLGEHQVNVEDKLTGSYRVW-- 140

Query: 150 REFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLP--EPIPYNAL 207
            ++CVQY+ES +DF+ RL   EG+ Y F HEA KHTL  +DA+         E IPY+  
Sbjct: 141 -DYCVQYQESSLDFISRLMELEGIAYHFSHEADKHTLVLTDAATQHQPFSGYEVIPYHQT 199

Query: 208 -AGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQQTRYQHFDA 266
            +GG+ D   I               L DY F+KP  ++L   Q      +      +D 
Sbjct: 200 PSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPN-AWLFQAQQNPASPKPGSIDVYDW 258

Query: 267 PGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVVV 326
           PGR+ D  +G  +++IR +  +         +    +  G+ F L      + N +++V 
Sbjct: 259 PGRFVDKGHGEFYARIRQERWQVEHQQIQATATAAGIAPGHTFTLTNAPFFSDNGEYLVT 318

Query: 327 SINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWR-AEPQPKPQVDGPMIATVVGPEG 385
           +  +  E+ +      G G T +   F++IP  + +R A+    P+  GP  A VVGP G
Sbjct: 319 AAGYHFEENRYAS---GEGETIHRTDFTVIPSAVVYRPAQTTAWPRTYGPQTAKVVGPNG 375

Query: 386 EEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVSFLN 445
           E I+ D++GRVK+ F WDR + G++ SSCWVRVS  WAG  YG + IPR+G EV+V F+N
Sbjct: 376 ESIWTDKYGRVKVKFHWDRLAKGDDTSSCWVRVSSAWAGQGYGGVQIPRVGDEVVVDFIN 435

Query: 446 GDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG--EGFNELSFEDQAGKEQIYL 503
           GDPD+PIITGR Y+  + PP+ LP   T+    + +  G  +  N L FED+AG EQ+++
Sbjct: 436 GDPDRPIITGRVYNDASMPPWALPAAATQMGFMSRSKGGSVDNANALRFEDKAGAEQVWI 495

Query: 504 HAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIKHNQHLTVEGESRTLV---KLDCSSE 560
            A+++ D  ++ND T  +   +   V+ ++  +++ NQ   V+G +  L    KLD S E
Sbjct: 496 QAERNMDTSVKNDETHSVGGARSHYVKKNELHRVEANQTQAVKGGTEILTGKGKLDASVE 555

Query: 561 IGGSLQQKIGSKAIYDAGTEVHLKAGNKLV-LEAGNELTIKAGGSFIKVDAGGVHVVGSA 619
                      + +  +GT++ L +G   + L A  ++ +        V+  G    G  
Sbjct: 556 -----------QYVIASGTKLRLVSGESAIELNANGKINLIGKEFNFFVEGDGYITTGGK 604

Query: 620 INLNSG----GSAGSGSGYGGKMAELPQGVDKAKTPQEIELAAVTPTQQS 665
           ++LN+     G+   GSG+ G +    Q         +   AA  P + S
Sbjct: 605 LHLNTSGTKPGTTAPGSGHKGDIDAAVQAKFTPGKENKAGAAASAPAEAS 654