Pairwise Alignments

Query, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

Subject, 895 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Variovorax sp. SCN45

 Score =  205 bits (522), Expect = 9e-57
 Identities = 225/926 (24%), Positives = 388/926 (41%), Gaps = 75/926 (8%)

Query: 22  IPSKLTRPGRLHNAIVRPRVLDLLQHATCYKLVLFRSPAGYGKTTMAAQWLADKPNLG-- 79
           + +KL  P      + R  + + +  AT  KLVL R+PAG+GKTT  AQ        G  
Sbjct: 9   LETKLNPPAATATQVPRTAIREEIAAATV-KLVLVRAPAGFGKTTAMAQIRERMEAQGIA 67

Query: 80  --WYSIDDSDNDPFRFMNYLLQAINKATHNACPNAQKLAEKRQFSSLHSLFSEVFAEMAD 137
             W ++D +DND  RF++ L +A           AQ+L  +   ++    F  V A +A 
Sbjct: 68  TAWLTLDRADNDVSRFLDCLAEA-----------AQRLGVEEPRAN--GPFDAV-AALAA 113

Query: 138 YHGECYVVLDDYHLIHDETIHEAMRFFLKHMPDNLTLVVTSRSTPPLGTANLRVRDLMIE 197
           +     + LDD+ ++ +  +   +R  ++H+P    LV+ SR  P LG   LR R  +IE
Sbjct: 114 HDAPFTLFLDDFEVVQEPAVLGLVREIVEHLPRRGQLVIGSRGLPDLGLGRLRARGQLIE 173

Query: 198 IGNELLAFDTEETTRFFNQRVSDGIDALTA------NHLRDYVEGWPSAMQLIALQAQHQ 251
           I  + L F  EET+ FF  R++    AL        + L    EGW +A+ L ++ A  +
Sbjct: 174 IDTDRLRFSLEETSAFFGLRMAHAKQALQTLPAELLSQLHRKTEGWVAAIWLASM-ALER 232

Query: 252 HRTLAQTIESVSHFNHAHLWDYLVEEVFDLLDDETRYFLMQCSVLDHFDDALVSSLTGRD 311
           H T    +E  S  + A + DYL E+V      + R FL++ S+L   D ++  +L  R 
Sbjct: 233 HGTETGFVERFSGSDRA-VADYLAEDVLAHQPPDIRDFLLRTSILRQLDASVCQALCPRA 291

Query: 312 DALAMIESLNRFGLFISPLEGE--TNWYRFHNLFAEFLAHQRQARIPQQEQDLQRAAAKA 369
           D  A++E L    LF++P+ G+   + +R+H+LFA+FL  +     P +   L  +AA  
Sbjct: 292 DCAAILERLAASNLFLTPVSGDGADSAWRYHSLFADFLRARLAHEQPGETARLHLSAAGW 351

Query: 370 WLEAAAPHQALRHAHLAQDTELLASILSQYGWKMFNQGELEVLEAAINQLSPPQLYREPK 429
           +     P  A+ HA    D     ++L  Y  +   QG + +L    + +   QL   P 
Sbjct: 352 YESHDRPVPAIDHAIEGGDHPYALALLDSYAAQFLEQGRMRMLARWFSAIPEHQLREHPF 411

Query: 430 LCMLQAWLAQSQHRYNDVGALLAKAAKEMKALNVELSTKEQGEFNALRAQVAINQNEPEK 489
           L  +  W     H     G   A    E          + +   + L   +   Q+  ++
Sbjct: 412 LQPIALWATCFTH-----GPWEAMRMLEQSGCLDSPIAEVRASAHTLVPLLLAMQDRHDE 466

Query: 490 ALELAELALSQLDHTTYRSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQY--QVYH 547
           A E+   +L++L      +  V  + +  +  V G    A  M++   +       ++Y 
Sbjct: 467 AYEIGRQSLARLPTGLPFADSVLLNAMAHILAVRGDQHEARRMLEAARERGSSTFNRMYT 526

Query: 548 QALWALLQQSEILLAQGYVQAAYEVQDNAFKLIEEQQLHQVPLHEFLLRIRAQILWCW-- 605
           ++L  L    E  L Q   +    V             H V  +       A +L+    
Sbjct: 527 ESLAGLFDLHEGRLRQATARLRMAVDST----------HAVSYNHSHGNAWAGVLYAGAV 576

Query: 606 ---NRLDEAEQAAYKGLSVLENHSQSKHLHC-YSMLARIAIGRGELDKAGRFIEQIQHLL 661
              N+L +AE      L +  +     H+   + M +R+A   G++D A + + ++++L 
Sbjct: 577 YETNQLVQAEHLLNVYLPLARDVGLPDHMILSHVMRSRLAFHAGDIDAAFQALTELEYL- 635

Query: 662 KQSTYHVDW---TANASLSLLLYWQVKENSTEIRQWLQSSTRPDKACNHFSQ------LQ 712
               +H       A A L       ++ N    R  L  +  P        Q      L 
Sbjct: 636 ---GHHRQLPRVVAGAKLERSRMLLLQGNGPASRDELARADDPALWDREKRQRLPAHDLD 692

Query: 713 WRNIARAQIQLGELSEARHTLDFIQEQAQEYQLVTDTNRNL---IVEALLAITEGDDLQA 769
           +  +ARA+  +    +AR  LD +  +           R L   ++ AL     GD   A
Sbjct: 693 YMALARARWDIA-FGDARAALDVLDAELHTALASAHNRRALKLRVLRALALQAAGDTAAA 751

Query: 770 CHKLKQALRLTNQTGMIGNFLIDGSKIGHLLEKLVHKGELGDLERHRAHLLLKEISTTQR 829
             +++  L+  +Q G +   L +G  +G L+ +     +  D    R   +L +      
Sbjct: 752 VREIETVLQAASQEGFVRLILDEGPAVGTLVHRYALSAQ--DAPAARGDPILADYL---- 805

Query: 830 SRSIHFDEEFVEKLVNHPNIPELVRTSPLTQREWQVLGLIYSGFSNEQIAHELDVAGTTI 889
            R +             P         PLT++E +VL L+  G+SN  +A +L V+ +T+
Sbjct: 806 QRLLQLAGPMPAAEPESPATGADAMKEPLTRKEIRVLQLLAEGYSNSAMAEKLFVSDSTV 865

Query: 890 KTHIRNLYQKLNIANRKEAVQTAEQL 915
           +TH+RN+  KL+  +R +AV  A +L
Sbjct: 866 RTHLRNINMKLDAKSRTQAVAIARRL 891