Pairwise Alignments

Query, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

Subject, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

 Score =  178 bits (451), Expect = 2e-48
 Identities = 221/921 (23%), Positives = 375/921 (40%), Gaps = 76/921 (8%)

Query: 28  RPGRLHNAIVRPRVLDLLQHATCYKLVLFRSPAGYGKTTMAAQWLADKPNLG---WYSID 84
           RP      + R R+   L+     +L+L  +PAG+GK+++A ++    P      W  + 
Sbjct: 24  RPPLPDGHVPRLRLCQRLEAGLGGRLLLVNAPAGFGKSSLAIEFCETLPEHWRSLWLGLS 83

Query: 85  DSDNDPFRFMNYLLQAINK---ATHNACPNAQKLAEKRQFSSLHSLFSEVFAEMADY--- 138
             D DP RF+  LL+ + +   A         K+ ++ Q  +       +  E+A Y   
Sbjct: 84  QRDADPGRFLERLLEGLQQYCPALGGQAMGLLKMRQRHQPFAFEEWLDGLLDELALYLQA 143

Query: 139 HGECYVVLDDYHLIHDETIHEAMRFFLKHMPDNLTLVVTSRSTPPLGTANLRVRDLMIEI 198
                +VLDDYHL     +   ++FFL H+P  L L+VTSR  P    A LR+   ++E+
Sbjct: 144 DTPLLLVLDDYHLAQGPVLDRCLQFFLNHLPPGLVLLVTSRQRPGWHLARLRLSRQLVEL 203

Query: 199 GNELLAFDTEETTRFFNQRVSDGIDALTANHLRDYVEGWPSAMQLIALQAQHQHRTLAQT 258
             + L    +E+     ++ + G+     ++L    +GW + ++   L A        Q 
Sbjct: 204 NEQDLRLTADESLAVIGRQPT-GLRGQALDNLIQRSDGWVAGLRFWQLAASDSADE--QA 260

Query: 259 IESVSHFNHAHLWDYLVEEVFDLLDDETRYFLMQCSVLDHFDDALVSSLTGRDDALAMIE 318
           +    H     + DYL+EEV D L  + + FL + +  + F   L  ++ GR D+ A++ 
Sbjct: 261 LPQALHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQERFCAPLCDAMRGRHDSAAVLS 320

Query: 319 SLNRFGLFISPLEGETNWYRFHNLFAEFLAHQRQARIPQQEQDLQRAAAKAWLEA----- 373
            L    +F+ PL+   +W+R+H+LF++ L    ++R   + Q      A  W EA     
Sbjct: 321 FLQAHQVFLVPLDEHGHWFRYHHLFSDLL----RSRQASESQVALHLRACRWFEAQDLLD 376

Query: 374 AAPHQALRHAHLAQDTELLASILSQYGWKMFNQGELEVLEAAINQLSPPQLYREPKLCML 433
            A  QALR  HL    +L+ S+  +   ++  +  + +L      L    L   P+L +L
Sbjct: 377 EAVEQALRAGHLDVAADLVQSLSEE---QLLAEQNVGMLLRWKMDLPDSLLISTPRLIVL 433

Query: 434 QAWLAQSQHRYNDVGALLAKAAKEMKALNVELSTKEQGEFNALRAQVAINQNEPEKALEL 493
            +W      + +    L    ++ + A +         ++ AL   +A  + + E+ L  
Sbjct: 434 YSWALGLACQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALSGVIARGRGDRERTLAY 493

Query: 494 AELALSQLDHTTYRSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQYQVYHQALWAL 553
              AL  L    Y  R+V  S +  +    G   RA    ++  +LA++         A 
Sbjct: 494 CGEALQSLPSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRVGNPLFEALAH 553

Query: 554 LQQSEILLAQGYV-QAAYEVQDNAFKL--IEEQQLHQV----PLHE-FLLRIRAQILWCW 605
             ++ +L A+G V +A  EV+    +L  +  Q+L+ V     L+E +LL  R Q     
Sbjct: 554 YDRARVLHARGEVLRALDEVRQGLQRLQGLSAQRLYAVRARLTLYEGYLLVSRLQPAQGR 613

Query: 606 NRLDE--AEQAAYKGLSVLENHSQSKHLHCYSMLARIAIGRGELDKAGRFIEQIQHLLKQ 663
            RL     E  A + +SVL  H     L         A    EL +A    E++ H+   
Sbjct: 614 ARLRAGLGEARACRDISVLIGHCVIATLD--GREGHFAEAFAELAEA----ERLMHI--W 665

Query: 664 STYHVDWTANASLSLLLYWQVKENSTEIRQWLQS-----STRPDKACNHFSQLQWRNIAR 718
               V + A  +L     W  +  +     WLQ            A   F  L   +IA 
Sbjct: 666 DVPPVYYLAMITLVKCELWLAQGRTDLAESWLQRLGQTYGGEQPAAAPEFHPLLPLHIAL 725

Query: 719 AQIQLGEL----SEARHTLDFIQEQAQEYQLVTDTNRNLIVEALLAITEGDDLQACHKLK 774
            Q  L  +     +A   L  + ++ Q    +  T   L     L + EG + QA   L 
Sbjct: 726 QQAALDRIQLRSDDAVQRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKEGQAAQLLP 785

Query: 775 QALRLTNQTGMIGNFLIDGSKIGHLLEKLVHKGELGDLERHRAHLLLKEISTTQRSRSIH 834
             L   +               G +++ +        LE+H   L        Q   +  
Sbjct: 786 SLLEAAH---------------GGVMQPMQPL-----LEKHPQWLQ----EQLQAGAACP 821

Query: 835 FDEEFVEKLVNHPNIPELVRTSPLTQREWQVLGLIYSGFSNEQIAHELDVAGTTIKTHIR 894
              E ++ L   P I        L+ RE  VL LI  G SN+QI+  L ++  T+KTH  
Sbjct: 822 VQAELLKHLPPVP-IASTGNGEALSGREMAVLELIAQGCSNQQISERLFISLHTVKTHAS 880

Query: 895 NLYQKLNIANRKEAVQTAEQL 915
           ++  KL +  R +AV  A+ L
Sbjct: 881 HINSKLGVERRTQAVAKAKSL 901