Pairwise Alignments

Query, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  202 bits (515), Expect = 6e-56
 Identities = 222/930 (23%), Positives = 400/930 (43%), Gaps = 79/930 (8%)

Query: 22  IPSKLTRPGRLHNAIVRPRVLD-LLQHATCYKLVLFRSPAGYGKTTMAAQ----WLADKP 76
           + +K + P      + R  ++D ++QH    +LVL R+PAG+GKTT+  Q     +AD  
Sbjct: 9   LATKFSPPAADARQVARDALVDAIVQHPA--RLVLVRAPAGFGKTTLMTQARQRLMADGV 66

Query: 77  NLGWYSIDDSDNDPFRFMNYLLQAINKAT-----HNACPNAQ------KLAEKRQFSSLH 125
              W ++D +DNDP RF+ YL  A+++ +     H+    A        LA   + +SL 
Sbjct: 67  ATAWLTLDSADNDPSRFLAYLAGALDELSPQEGGHDPAGTATVPIGEVALALMERTASLP 126

Query: 126 SLFSEVFAEMADYHGECYVVLDDYHLIHDETIHEAMRFFLKHMPDNLTLVVTSRSTPPLG 185
             F+                +D++ ++    +   +  FL+ +P    LV+ SR+ P L 
Sbjct: 127 FPFA--------------FFIDEFEVVRSPGVMALLAQFLECVPAGSRLVIGSRNVPDLR 172

Query: 186 TANLRVRDLMIEIGNELLAFDTEETTRFFNQRVSDGIDALTANHLRDYVEGWPSAMQLIA 245
            A LR    + EI  + L F  +ET RFF+   +  + +     L    EGW +A+ L +
Sbjct: 173 LARLRASGQLQEIDVQKLRFSLDETRRFFDTLGTQALGSEDLGILHAKTEGWVAALWLAS 232

Query: 246 LQAQ-HQHRTLAQTIESVSHFNHAH--LWDYLVEEVFDLLDDETRYFLMQCSVLDHFDDA 302
           L  + HQ+R      + ++ F+     L +YL EEV      + R  L+  S+L  F   
Sbjct: 233 LALERHQYRR-----DFIAAFSGTEDSLAEYLAEEVLAQQPPDVRQLLLSTSILREFSAP 287

Query: 303 LVSSLTGRDDALAMIESLNRFGLFISPLEGETNWYRFHNLFAEFLAHQRQARIPQQEQDL 362
           L ++L    D+ +++  L    +F+ P+EG    +R+H+LF+ FL  Q Q   P+   +L
Sbjct: 288 LCAALLPGMDSESILRQLAGANVFLIPIEGRPGHWRYHSLFSSFLRGQLQRERPEAVPEL 347

Query: 363 QRAAAKAWLEAAAPHQALRHAHLAQDTELLASILSQYGWKMFNQGELEVLEAAINQLSPP 422
            RAAA+ ++    P  A+ H   A +      +L +    +  QG L +L    + L P 
Sbjct: 348 HRAAARWFMAQERPVPAVDHYIAAGEAAQAVEVLEREAMPLLMQGRLRLLTRWFDALPPA 407

Query: 423 QLYREPKLCMLQAWLAQSQHRYNDVGALLAKAAKEMKALNVELSTKEQGEFNALRAQVAI 482
            L   P L ++  W           G   + A      L      + +    AL+A +  
Sbjct: 408 ALKEHPLLQVVYLWSTCFTR-----GPQASLALMRNTGLEQSDGPEIKVHVAALQASMLA 462

Query: 483 NQNEPEKALELAELALSQLDHTTYRSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQ 542
             +  E+A  +   +L  L  T+  +     +V      +LG    A  ++ +  +   Q
Sbjct: 463 LLDRWEEAHAIGVRSLHLLPSTSAFANSALVNVTANGAAMLGLFPEARQLLDRARRSQGQ 522

Query: 543 YQVYHQALWALLQQSEILLAQGYVQAAYEVQDNAFKLIEEQQLHQVPLHEFLLRIRAQIL 602
                  +++   +  I L +G ++ A      A +  +   L     + +   + A  +
Sbjct: 523 AVSAFHRMYSETIEGMIDLHEGRLREARARFHLALQSSQGSSLDTAQGNAWAGLLYAASV 582

Query: 603 WCWNRLDEAEQAAYKGLSVLENHSQSKHLHC-YSMLARIAIGRGELDKAGRFIEQIQHL- 660
           +  + L +A++     L +  +   S H+   + +L+RIA   GE+D A + + ++++L 
Sbjct: 583 YEADDLRQAKRLLQVYLPLARDVWLSDHVVLGHRLLSRIAFAEGEIDHAFQGLSELEYLG 642

Query: 661 LKQSTYHVDWTANASLSLLLYWQVKENSTEIRQWLQSSTRPD-----KACNH-------- 707
            ++    +   A    + +L  Q   ++    Q L+++  P+      A  H        
Sbjct: 643 HERQLPRLAAAARLERARMLLMQGHHDAA--AQELRTAGTPEIWRVVGARRHLGHEWEDP 700

Query: 708 -FSQLQWRNIARAQIQLGELSEARHTLDFIQEQAQEYQLVTDTNRNLIVEALLAITEGDD 766
              QL+W  +A      G+  +A   L+     AQ    V  TN+  ++ A+     GD+
Sbjct: 701 EIGQLRWEAVA------GDPRKAAVALEASAALAQRGGRVRRTNQLQLLNAVALARAGDE 754

Query: 767 LQACHKLKQALRLTNQTGMIGNFLIDGSKIGHLLEKLVHKGELGDLERHRAHLLLKEIST 826
            QA   L Q L+     G++   L +G  +  L+ +     + G L    A  L      
Sbjct: 755 EQAQEVLMQVLQPACTEGLMRLVLDEGEPVARLVARAQATLDAGQLGPLFADYL------ 808

Query: 827 TQRSRSIHFDEEFVEKLVNHP-NIPELVRTSPLTQREWQVLGLIYSGFSNEQIAHELDVA 885
            QR R         E L   P  +P ++    LT +E ++L L+  G+SN  +  +L V+
Sbjct: 809 -QRLRIAFGPLASEEPLPTVPVQLPPMMEA--LTPKEIRLLQLLAEGYSNRALTEKLFVS 865

Query: 886 GTTIKTHIRNLYQKLNIANRKEAVQTAEQL 915
            +T++TH+RN+  KL   NR +AV  A +L
Sbjct: 866 DSTVRTHLRNINGKLGANNRTQAVAMARRL 895