Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (650), Expect = 5e-72
 Identities = 159/377 (42%), Positives = 229/377 (60%), Gaps = 12/377 (3%)

Query: 180 VDAEIAEMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFA 239
           +D EIA     A ++L +       I L+I + V    + I R +M+PL+  +++I + A
Sbjct: 257 IDEEIAYA---ALDELRRSTLIFTVIALVISVFV---LLFIVRVLMKPLDTLNDAIQNVA 310

Query: 240 SGDADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQV 299
           SG+ DLT R+   +  EF KL+  FN F E+LQ  + +   +G +++  + + S    Q 
Sbjct: 311 SGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQS 370

Query: 300 DHLASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSV 359
                +Q  E EQ+ATAM EM TT+ +++NNA  AA +AK A+D A    ++V    +++
Sbjct: 371 AEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAI 430

Query: 360 QALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFA 419
             L+  +  A   +  LE    NI + L VI DIA+QTNLLALNAAIEAARAGE GRGFA
Sbjct: 431 DTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFA 490

Query: 420 VVADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQ 479
           VVADEVR LA RTQ+ST +I  MI++L++G++A   AM  S+  + + V +A  A EAL+
Sbjct: 491 VVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALE 550

Query: 480 KIQASIGTIMDMNALIATATEEQSIVGQEISQRIVVI---SDQSSESADLANQNRQGSQT 536
           KI+ +I  I DMN  IA+A EEQS+V +EI+   V I   SDQ +ESAD AN + Q  QT
Sbjct: 551 KIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQ-IQT 609

Query: 537 LNGRAHELYELVARFKV 553
            N R  +   ++ +FKV
Sbjct: 610 ENIREQD--AILNKFKV 624